Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0695 ATGGCGTCTGCTATTTTAGCGAATCGAAACAACGAACCCAGTTGGCCTACGAGCAAACGCAACGGCGGCGGTGGGGGTGGTGGTGGTGGTGGAGGAGGAGGAGGAGGAGGTGGAGGTGGAGGAGGAGCGTTTATGGCGAGAGCTCCTTTCTCGAACCCTAAATCTAAACCTAAAATGAAAAAGAGGAAAACTAATGGTGAAATTAACAACTTCCATCAGATGGGTGAAGAACAACTGGGCAACGTAACAACTCTATCTCCCTCGGATGATGGGTCTTTCATCGATCGTCACCATGGATCTTCGAACTCCGAGTATAATCATTATGTGAGTTTCAATATAGCTTCGTGTTCTGGTAGGGATTTGGTTGAGTTGAAGAAACGCTTACTGGGTGAGCTTGAACAAGTTAGGCGAATCAAGAAACGCATTGAATCTGTGGACATTGGTTTCGGACCTAATCATTTGAAGAAATCATCCAAGACCAAGGGGATTAACCACAAGCGGCCGAAGCCGCTGCCAACCAGTTCTGGCAGAGATTTGCAGGTTCCGAATTCGTTTAATGAAGTTGGGAATCTGAATCTGATGAAGACTTGCGCTCAAATCCTGAACAAGTTGATGAAGCAGAAATATGCGTCGGTCTTCAACAAGCGGGTGGATGTGGTTGGGATGGGTCTTCATGACTATTATGATATTGTTAAGCGTCCTATGGATTTAGGTACTGTGAAATCTAAACTGGCTAAGAATTCTTATCACTCACCTTTGGATTTTGCTGAAGATGTTAGGCTAACCTTTAACAATGCCATGATCTACAATCCCAAGGGTCATGAAATTCATACCATGGCCGAGCAGTGGTTGGTGAAATTCGACGAATTGTTTCTTCCTGTTCGTGAGAAGTTGGGGGGTGGACTGAAGCAGCAGCCAGATCTGTATGATGAGGATTTGCAAGCCAGTTCTTGGAATCATGAAGAGGAGGTCGTGGAGAAGGTGAACTTCAATAACTCGAATGGGAACAAATCAGAAGAAGCAAGAGCGCCATCGAGCTCATCAAAACCGCCTTCGATACAGTCACCGGTGAAAACTCCATCTCCAGTGCGGGCACCACAGGTGAAGCCTGTAAGGCAGCCAAAGCCAAAGGCAAAGGATCTCAACAAAAGGGATATGAGTTTGGAGGAGAAACACAGATTGGGAGTTGGATTGCAGGGCTTGCCTCCTGAGAAAATGGATCAGGTGATACAGATTGTGAAGAGGAGGAGTGGACATTTGAGGCAGGATGGGGATGAGATTGAGCTTGACATTGAAGCTGTTGATATAGAGACGCTTTGGGAACTCGACCGGCTAGTCACAAATTGGAAGAAAATGATGAGCAAGGTCAAGAGGCAAGCTCTCTTCACTAACAATCCGAATGCTGATTTGAGTAAAGCGAATGATAATGAGACGTCATCTGCAAATGAGATGGATGAGGTTAAAACAGAGGCAAAGAAGCTTAGAAAAGGTGATATGGGTGAGGAAGATGTGGATATTGGCGACGAAACGATGCCAATGGGCGGTTTTCCTCCTGTTGAAATTGAAAGAGATGCAGCTGCTCATGCTAGCAGTAGTTCTGATAGCTCTAGTAGTTCAGGGAGTGATGATTCTTCCTCCTCAAGTGGTTCCGATTCAGAAGGTAGTTCCTCCGACAGTGATTCGGATGGTGGCGGTGGCGGTGGCGGTGGCGATGGTGGCAATGGTCAATCCTAG 1734 46.48 MASAILANRNNEPSWPTSKRNGGGGGGGGGGGGGGGGGGGGGAFMARAPFSNPKSKPKMKKRKTNGEINNFHQMGEEQLGNVTTLSPSDDGSFIDRHHGSSNSEYNHYVSFNIASCSGRDLVELKKRLLGELEQVRRIKKRIESVDIGFGPNHLKKSSKTKGINHKRPKPLPTSSGRDLQVPNSFNEVGNLNLMKTCAQILNKLMKQKYASVFNKRVDVVGMGLHDYYDIVKRPMDLGTVKSKLAKNSYHSPLDFAEDVRLTFNNAMIYNPKGHEIHTMAEQWLVKFDELFLPVREKLGGGLKQQPDLYDEDLQASSWNHEEEVVEKVNFNNSNGNKSEEARAPSSSSKPPSIQSPVKTPSPVRAPQVKPVRQPKPKAKDLNKRDMSLEEKHRLGVGLQGLPPEKMDQVIQIVKRRSGHLRQDGDEIELDIEAVDIETLWELDRLVTNWKKMMSKVKRQALFTNNPNADLSKANDNETSSANEMDEVKTEAKKLRKGDMGEEDVDIGDETMPMGGFPPVEIERDAAAHASSSSDSSSSSGSDDSSSSSGSDSEGSSSDSDSDGGGGGGGGDGGNGQS 577
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7632514 7635109 + Hsped.02g06950.1 Hepe02g0695 562196

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0695 577 MobiDBLite consensus disorder prediction 153 180 - -
Hepe02g0695 577 ProSiteProfiles Bromodomain profile. 205 277 IPR001487 GO:0005515(InterPro)
Hepe02g0695 577 SMART bromo_6 186 296 IPR001487 GO:0005515(InterPro)
Hepe02g0695 577 Gene3D - 189 298 IPR036427 GO:0005515(InterPro)
Hepe02g0695 577 MobiDBLite consensus disorder prediction 74 90 - -
Hepe02g0695 577 PANTHER OSJNBA0053K19.4 PROTEIN 64 561 - -
Hepe02g0695 577 MobiDBLite consensus disorder prediction 466 577 - -
Hepe02g0695 577 MobiDBLite consensus disorder prediction 528 562 - -
Hepe02g0695 577 Gene3D - 379 456 IPR038336 -
Hepe02g0695 577 MobiDBLite consensus disorder prediction 74 98 - -
Hepe02g0695 577 MobiDBLite consensus disorder prediction 479 502 - -
Hepe02g0695 577 Pfam Bromodomain 197 281 IPR001487 GO:0005515(InterPro)
Hepe02g0695 577 MobiDBLite consensus disorder prediction 329 361 - -
Hepe02g0695 577 ProSiteProfiles NET domain profile. 376 457 IPR027353 -
Hepe02g0695 577 MobiDBLite consensus disorder prediction 1 18 - -
Hepe02g0695 577 PRINTS Bromodomain signature 224 240 IPR001487 GO:0005515(InterPro)
Hepe02g0695 577 PRINTS Bromodomain signature 240 258 IPR001487 GO:0005515(InterPro)
Hepe02g0695 577 PRINTS Bromodomain signature 258 277 IPR001487 GO:0005515(InterPro)
Hepe02g0695 577 MobiDBLite consensus disorder prediction 1 62 - -
Hepe02g0695 577 MobiDBLite consensus disorder prediction 329 384 - -
Hepe02g0695 577 Pfam Bromodomain extra-terminal - transcription regulation 386 447 IPR027353 -
Hepe02g0695 577 SUPERFAMILY Bromodomain 169 291 IPR036427 GO:0005515(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0695 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0695 Hepe-Chr2:7632514 Hepe07g0992 Hepe-Chr7:13537214 6.73e-51 dispersed
Hepe02g0695 Hepe-Chr2:7632514 Hepe07g0373 Hepe-Chr7:3795298 9.83e-153 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g868 . . . . . . Bma05g00620 . . Cmo11g01450 . . . . Sed08g2798 Cpe04g00359 . Bhi05g00968 Tan02g1117 Cmetu01g2617 Lac12g0105 Hepe02g0695 . . Cla10g00935 Cam10g0956 Cec10g0994 Cco10g0953 Clacu10g0981 Cmu10g1766 Cre10g1139 . Cone9ag1431 . . . Csa07g00643 . Cme01g00160 . Blo13g00200 Bda15g00483 . . Bpe05g00445 . Bma08g00032 . . . Cma11g01678 . Car11g01166 . . . . . . . . . . Cla09g01617 Cam09g1535 Cec09g1779 Cco09g1862 . . Cre01g0782 . . Chy01g00168 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001096 3 2 3 3 1 2 4 2 2 2 2 2 4 2 2 4 2 4 4 2 2 2 2 2 2 2 2 8 5 1 80