Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0701 ATGACCTCTGGAGATATTTTGGGTGCAAGAATCACTTACAATGGAGCATTGAGGAGATTGGATGTTACTCTGAAAGATCCTCAGGTTCCAAACGAGTCGATTACGTTGAATCTTACTGATATTTCCATTGATTTGAAGGGAATTCTTCCGGCGAGAGTGATCGTTGGGTTCTCTGCATCAACAGGTCAGTCGATCCCAATTCAAGCAATTAGAAGTTGGAATTTCACTTCGAGTTTGGATCTGATTGCTGTAACTGAAACTGGTGGGGGGGAATCCAAGTTGTGGATTGTGGGGCTGGGGATTGGATTGGTTGTTCTGATATCTCTGTCTGGTTTGTTATTTGGTATTTGGTGGAGAAGAACAAGGAGGAAACAGAAAGAAAGAGGAGAAGGAGATGATGATGATGATGATTTTGGAGATGAAGAAATTGGCATGGTGGAGAATGTTGTTGATGAAGATTTCATAAAAGGAACTGGGCCAAAGAGATTTGCTTACAAGGAACTGGTTAAAGCAACCAACAACTTTTCTGAAGAGGGAAAGCTTGGACAAGGTGGTTTTGGTGGTGTTTACAAAGGTTTTGTAGCAGAACTAAACATGGAAATAGCAGCAAAGAAGATATCAAGCAATTCCAAACAGGGCAAAAAGGAGTACATCTCCGAAGTGAATATCATAAGCCGTTTGCGACATCGGAATCTTGTTCAACTCGTCGGATACAGCCACGAACGCGGCCATTTCCTTCTCGTTTACGAGTACATGCCGAACGGGAGCTTGGATTTCCATCTCTTCGGGAAGAAACCGCGCCTCTCCTGGCCTGTAAGATACAAAATAGCACAAGGCATAGCCTCCGCCTTGCTCTACCTCCACGAGGAATGGGAGCAATGCGTTGTCCACAGAGATATCAAATCAAGCAATGTGATGTTGGACTCAAACTTCAACGCGAAAGTTGGCGACTTCGGTCTAGCCAGGCTAGTCGACCACGGCCTCCACTCGGCCACAACCGTCGTAGCAGGCACGATGGGCTACCTGGCTCCAGAGTCTCTCCTTACGAGCAAGGCGAGTAGGGAATCCGACGTGTACAGCTTCGGGGTGGTGGCATTGGAGATAGCCTGTGGGAGAAAGGCAGTGGAGTACCATGAACAAGAAGAAGAAAAGACAAGTTTGGTGAATTGGGTTTGGGGGTTGTATGGACAAGGAAGGGTTCTAGAGGCAGCTGATAAGGGATTGAATGGAGAGTTCAATCAAGAAGAAATGGTGTGTTTGATGACTGTGGGGCTGTGGTGTGCTCACCCAAATCATAACCTTAGGGCTTCTATAAGGCAAGCAATTCAGGTGCTGAACTTTGAGGCTCCTTTGCCTAAACTCCCAACACAAATGCCTGTGCCTATGTTCTATACTCCCACAGCTGCCATTCAGAATCCTTTTTCTTATACTTACTCAACAACCAACACAAACAGTCAATTATCTCAGCCTGTTTCCTCCAAATCATCCTTGTAA 1494 45.65 MTSGDILGARITYNGALRRLDVTLKDPQVPNESITLNLTDISIDLKGILPARVIVGFSASTGQSIPIQAIRSWNFTSSLDLIAVTETGGGESKLWIVGLGIGLVVLISLSGLLFGIWWRRTRRKQKERGEGDDDDDDFGDEEIGMVENVVDEDFIKGTGPKRFAYKELVKATNNFSEEGKLGQGGFGGVYKGFVAELNMEIAAKKISSNSKQGKKEYISEVNIISRLRHRNLVQLVGYSHERGHFLLVYEYMPNGSLDFHLFGKKPRLSWPVRYKIAQGIASALLYLHEEWEQCVVHRDIKSSNVMLDSNFNAKVGDFGLARLVDHGLHSATTVVAGTMGYLAPESLLTSKASRESDVYSFGVVALEIACGRKAVEYHEQEEEKTSLVNWVWGLYGQGRVLEAADKGLNGEFNQEEMVCLMTVGLWCAHPNHNLRASIRQAIQVLNFEAPLPKLPTQMPVPMFYTPTAAIQNPFSYTYSTTNTNSQLSQPVSSKSSL 497
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7688021 7690341 + Hsped.02g07010.1 Hepe02g0701 562202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0701 497 Gene3D - 1 89 - -
Hepe02g0701 497 PANTHER - 6 467 IPR050528 GO:0005886(PANTHER)
Hepe02g0701 497 ProSiteProfiles Protein kinase domain profile. 175 454 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g0701 497 Pfam Legume lectin domain 2 78 IPR001220 GO:0030246(InterPro)
Hepe02g0701 497 ProSitePatterns Serine/Threonine protein kinases active-site signature. 295 307 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g0701 497 CDD STKc_IRAK 189 446 - -
Hepe02g0701 497 FunFam L-type lectin-domain containing receptor kinase IX.1 160 251 - -
Hepe02g0701 497 SMART serkin_6 175 445 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g0701 497 ProSitePatterns Protein kinases ATP-binding region signature. 181 205 IPR017441 GO:0005524(InterPro)
Hepe02g0701 497 SUPERFAMILY Concanavalin A-like lectins/glucanases 2 196 IPR013320 -
Hepe02g0701 497 Gene3D Transferase(Phosphotransferase) domain 1 252 467 - -
Hepe02g0701 497 SUPERFAMILY Protein kinase-like (PK-like) 159 478 IPR011009 -
Hepe02g0701 497 Gene3D Phosphorylase Kinase; domain 1 160 251 - -
Hepe02g0701 497 FunFam Lectin-domain containing receptor kinase A4.3 252 465 - -
Hepe02g0701 497 Pfam Protein kinase domain 176 443 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0701 Hepe-Chr2:7688021 Hepe07g0579 Hepe-Chr7:6253157 8.39e-170 dispersed
Hepe02g0699 Hepe-Chr2:7669919 Hepe02g0701 Hepe-Chr2:7688021 1.10e-150 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72536 PF00069 Pkinase 4.60E-48 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0701 - - - 0.0