Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0702 ATGAAGCCTCATCAGATCTTTGCTCTTGGAAATCCTCGTTTCTCCACCTTTGCTGAACCGTCTTCCAAGCCGCATCCTCCGAGAGTTCCTAATCTTATAGGAGGGAATTTTGTTGATTCTCGATCCTCAGCATTCATAGATGTCATAAATCCAGCGACACAAGAAGTTGTTTCTCAAGTTCCATTGACCACAAATGAAGAATTTAAAGCTGCAGTATCTTCAGCAAAGAAGGCTTTTCCTGCATGGCGTAATACTCCAGTTACAACTCGTCAACGGATTATGTTCAAGCTTCAAGAACTTATTAGGCGAGATATTGACAAACTTGCTCTAAATATTACCACAGAACAAGGAAAAACATTAAAGGATGCACATGGAGATGTATTCCGTGGGCTAGAGGTTGTGGAACATGCATGTGGAATGGCATCTCTGCAAATGGGGGAGTATGTCTCTAATGTGTCACATGGAATTGATACGTACAGCATCAGAGAGCCTCTTGGTGTTTGTGCTGGGATTTGTCCATTCAATTTTCCAGCCATGATTCCCCTATGGATGTTTCCAGTAGCTGTTACATGTGGGAATACCTTTGTTTTGAAGCCTTCAGAAAAAGATCCAGGAGCTTCTATAATTCTTGCAGAGTTAGCAATGGAGGCTGGATTGCCTAATGGTGTCCTAAATGTGGTTCATGGTACTAATGATGTTGTTAATGCCATTTGTGATGATGAAGATATAAAGGCAATATCATTTGTCGGTTCAAACATTGCGGGCATGCATATATATTCAAGGGGGTCAGCTAAAGGAAAACGTGTTCAGTCCAACATGGGGGCAAAAAATCATGCAATTGTCTTACCCGATGCAAGCTTAGATGGTACTTTGAATGCTTTGATTGCTGCTGGTTTTGGTGCTGCTGGACAAAGGTGCATGGCACTCAGTACAGTTGTCTTTGTTGGAGACTCCAAGTTGTGGGAGGAAAAACTTGTAGAACGTGCCAAAACTCTGAAGGTAAATTCTGGAATAGAACCTGATGCAGATCTTGGTCCTGTAATTAGCAAGCAGGCAAAGGAGAGGATCCACAGATTAGTTCAATCTGGCATTGATAGTGGAGCCAGGCTACTGCTAGATGGGAGAAATATAGTGGTTCCCGGATACGAGCATGGCAATTTTATTGGCCCTACTATCTTATCGGATGTGACGCCCGACATGGAATGCTATAAGGAAGAAATATTTGGCCCAGTTCTGCTTTGCATGCAGGCTGAAAGTTTAGAGGAGGCCATTAGCATCGTTAATGGAAATAGGTATGGCAATGGAGCTTCAATTTTCACCACTTCTGGCATAGCTGCGAGGAAGTTTCAGTCGGATATTGAGGCTGGACAGGTCGGGATCAACGTTCCGATTCCAGTTCCCTTACCCTTCTTCTCGTTCACTGGCTCCAAGGCATCTTTTGCTGGTGATCTCAATTTCTATGGGAAGGCTGGGGTTAACTTCTTCACTCAGATCAAAACAGTGACACAACAATGGAAAGACTCACCTGGGGGAACTGCAGTTAACCTTGCAATGCCAACCTCTTTGAAGTCTTAG 1575 43.49 MKPHQIFALGNPRFSTFAEPSSKPHPPRVPNLIGGNFVDSRSSAFIDVINPATQEVVSQVPLTTNEEFKAAVSSAKKAFPAWRNTPVTTRQRIMFKLQELIRRDIDKLALNITTEQGKTLKDAHGDVFRGLEVVEHACGMASLQMGEYVSNVSHGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIILAELAMEAGLPNGVLNVVHGTNDVVNAICDDEDIKAISFVGSNIAGMHIYSRGSAKGKRVQSNMGAKNHAIVLPDASLDGTLNALIAAGFGAAGQRCMALSTVVFVGDSKLWEEKLVERAKTLKVNSGIEPDADLGPVISKQAKERIHRLVQSGIDSGARLLLDGRNIVVPGYEHGNFIGPTILSDVTPDMECYKEEIFGPVLLCMQAESLEEAISIVNGNRYGNGASIFTTSGIAARKFQSDIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFFTQIKTVTQQWKDSPGGTAVNLAMPTSLKS 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7694932 7702863 + Hsped.02g07020.1 Hepe02g0702 562203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0702 524 SUPERFAMILY ALDH-like 23 506 IPR016161 GO:0016491(InterPro)
Hepe02g0702 524 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 48 482 IPR016162 GO:0016491(InterPro)
Hepe02g0702 524 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 274 474 IPR016163 GO:0016620(InterPro)
Hepe02g0702 524 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 19 521 IPR010061 GO:0004491(InterPro)|GO:0004491(PANTHER)|GO:0005739(PANTHER)|GO:0006210(PANTHER)|GO:0006574(PANTHER)|GO:0018478(PANTHER)
Hepe02g0702 524 Pfam Aldehyde dehydrogenase family 37 501 IPR015590 GO:0016491(InterPro)
Hepe02g0702 524 NCBIfam CoA-acylating methylmalonate-semialdehyde dehydrogenase 31 505 IPR010061 GO:0004491(InterPro)
Hepe02g0702 524 FunFam Methylmalonate-semialdehyde dehydrogenase [acylating] 33 280 - -
Hepe02g0702 524 CDD ALDH_F6_MMSDH 29 505 IPR010061 GO:0004491(InterPro)
Hepe02g0702 524 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 299 310 IPR016160 GO:0016491(InterPro)
Hepe02g0702 524 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 274 474 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0702 Hepe-Chr2:7694932 Hepe09g0747 Hepe-Chr9:7167395 5.33e-60 dispersed
Hepe02g0702 Hepe-Chr2:7694932 Hepe04g1389 Hepe-Chr4:69545447 2.96e-232 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0702 K00140 - csv:101204924 968.763