Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g0710 | ATGTCGGACTCCAATTTTCAAGACGCGATGTACGATGCCGGAATCATGAACAACGATGGCCGGGATTTGGATGACATTCAGACCCGAGTTGGCGACGAAGATGACGACGTTGCCGGTGGGGAAGAGTCCATAGACAACCCTCAGATGCGCTTCGAAGACTCTGTGGGAATGAGCGGCTCGGTCTCGGCGATGGACCGAGTCCAGGATGTTGTTCCATCCACGTTTGTTTCCGGCTCCGATTACAACCCTTTGACTGGAAACGGTGGTGCTGATCAGCTTACGCTATCGTTCCGAGGGGAGGTTTACGCTTTTGACTCTGTATCACCGGACAAGGTGCAAGCCGTGCTTTTGCTTTTAGGTGGATATGAAATTCCTTCTGGTATTCCTGCTGTTGGAGGTGTTCCCGTCAACCAACAGGGTGCCGATGGCTTTCCTGTCAGGTCAGTTCAACCACAAAGAGCTGCTTCATTGAGTCGGTTCAGAGAGAAGAGAAAAGAAAGGTGTTTCGAGAAGAAAATTCGGTATAATGTGCGAAAAGAAGTTGCACTCAGAATGCAGCGGAAGAAGGGCCAATTTATATCGTCTAAAGCTAATGGAGATGAAGTGGGCTCATCTTCAGTTTTGGCTCAAACGTTGGATTCTGGTCAAGATGATGGCTTGTTGGAAACTTCATGTACGCATTGTGGAATCAGTTCAAAATCTACCCCAATGATGCGTCGAGGACCAGGTGGCCCAAGGACTCTGTGCAATGCATGTGGGCTGAAGTGGGCCAATAAGGTTTATTTATTAATCTAA | 795 | 48.55 | MSDSNFQDAMYDAGIMNNDGRDLDDIQTRVGDEDDDVAGGEESIDNPQMRFEDSVGMSGSVSAMDRVQDVVPSTFVSGSDYNPLTGNGGADQLTLSFRGEVYAFDSVSPDKVQAVLLLLGGYEIPSGIPAVGGVPVNQQGADGFPVRSVQPQRAASLSRFREKRKERCFEKKIRYNVRKEVALRMQRKKGQFISSKANGDEVGSSSVLAQTLDSGQDDGLLETSCTHCGISSKSTPMMRRGPGGPRTLCNACGLKWANKVYLLI | 264 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 7787619 | 7794189 | - | Hsped.02g07100.1 | Hepe02g0710 | 562211 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g0710 | 264 | Pfam | tify domain | 90 | 120 | IPR010399 | - | |
Hepe02g0710 | 264 | Gene3D | - | 221 | 261 | IPR013088 | GO:0006355(InterPro)|GO:0008270(InterPro) | |
Hepe02g0710 | 264 | Pfam | GATA zinc finger | 225 | 259 | IPR000679 | GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe02g0710 | 264 | MobiDBLite | consensus disorder prediction | 18 | 34 | - | - | |
Hepe02g0710 | 264 | ProSitePatterns | GATA-type zinc finger domain. | 225 | 252 | IPR000679 | GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe02g0710 | 264 | PANTHER | GATA TRANSCRIPTION FACTOR 28 | 39 | 260 | IPR045280 | GO:0006355(InterPro) | |
Hepe02g0710 | 264 | ProSiteProfiles | CCT domain profile. | 153 | 195 | IPR010402 | GO:0005515(InterPro) | |
Hepe02g0710 | 264 | ProSiteProfiles | Tify domain profile. | 86 | 121 | IPR010399 | - | |
Hepe02g0710 | 264 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 222 | 259 | - | - | |
Hepe02g0710 | 264 | CDD | ZnF_GATA | 224 | 259 | IPR000679 | GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe02g0710 | 264 | Pfam | CCT motif | 153 | 195 | IPR010402 | GO:0005515(InterPro) | |
Hepe02g0710 | 264 | SMART | tify_2 | 86 | 121 | IPR010399 | - | |
Hepe02g0710 | 264 | SMART | GATA_3 | 219 | 264 | IPR000679 | GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe02g0710 | 264 | MobiDBLite | consensus disorder prediction | 13 | 47 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g0710 | Hepe-Chr2:7787619 | Hepe10g0438 | Hepe-Chr10:4941738 | 4.30e-69 | dispersed | |
Hepe02g0710 | Hepe-Chr2:7787619 | Hepe09g0101 | Hepe-Chr9:825148 | 3.07e-07 | transposed | |
Hepe02g0710 | Hepe-Chr2:7787619 | Hepe04g0907 | Hepe-Chr4:63332278 | 4.85e-07 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
54988 | PF06203 | CCT | 9.50E-16 | CL0281 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g0710 | - | - | - | 0.0 |