Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe02g0733 | ATGGACATCACCTCGGCGGCCATGGACGATCCTCCTACCAGTCCCGTTAAGGCATTGGCTACCTTTCTAATCCGTCGCCTTTCCGATGAGCTCCGGTCAATTGCTCATTCCCCCGATCCCAAGCTCCATTACCCTCTATTCATCGAATTCGCAGAGCTGATGGACGACGACCCATCTCTCGCTCGTCTTGTCTTCTCCCATCCGACCGAGTACTTGCGCATTTTTGACGATGCTGCTGTTTGGGCTCATAAGATTATTTTGGGTGATTCGAGAAGTTGCGTGAATGGAATTAAGAAAGATTTCATCCATGTTCGTATTAATGTCACTGGCTCCCCGCTGGAATCGCCTGAGACTTTTCCAAGTATTGGGTCTGTCAGAGTGAAGCATCGTGGAGTTCTTCTCACACTTAAAGGGACGGTAATCAGATCTGGGGCAATTAAGATGTATGAAGGGGAGAGATGGTATATGTGCCGGAAGTGCAAGCACAAGTTCCCAGTTTATCCAGAGCTAGAAACTAGAAACTCAATACAGTTACCATCATTTTGCCCCTCTCAGAGGGCAAAACCATGTGAAGGTAAAAGTTTTGAGTGCTTGGAAGGTTCTGTAGTACGCCATGATTACCAAGAGATCAAAATTCAGGAGAGTACACAAGTACTGGGTGTGGGGTCCATTCCTCGTGCCATTCTAGTCATTCTCAAAGATGACCTTGTTGACCTTGTCAAAGCTGGAGGAGTATTAAGTGCAAAGTGGTCTCCAGACCTCAAAGATGTACGATGTGACCTTGATCCTATGCTAATTGCTAATCATGTGAGAAGAACCAATGAACTAAAGGCCGAGGTTGACATCCCTGATGATATAATTATGAAATTTAGGCAGTTCTGGTCAGATTTCAAAGAATCTCCTCTAAAAGGACGAAATGCTATTCTAAGAGGTATATGCCCTCAAGTGTTTGGACTTTTCACTGTAAAACTTGCAGTGGCTTTAACACTCATCGGAGGTGTACAACATGTGGATATATCTGGTACTAAAGTTCGAGGAGAATCTCATCTACTGTTGGTTGGCGATCCTGGTACTGGAAAATCACAGTTCCTGAAATTTGCTGCCAAGTTGAGCAACCGAGCTGTTATTACCACTGGATTAGGAAGCACTAGCGCTGGACTAACTGTTGCTGCTGTCAAGGATGGAGGGGAATGGATGCTGGAAGCTGGGGCACTTGTACTCGCAGATGGAGGACTTTGTTGCATAGATGAAGTGGACAGCATGAGAGAACATGACAGAGCCACGATCCATGAAGCAATGGAGCAACAGACTATAAGTGTCGCAAAGGCTGGTCTTGTAACAACTCTCAGTACTAGAACGATAGTATTTGGTGCAACAAATCCTAAAGGACATTACGACCCTGAACAACCTCTATCTGTCAATACAACACTCTCCGGTCCCTTATTGAGCAGATTTGATATCGTTCTTGTGCTTTTAGATACAAAAAATCCCGAATGGGATGCAGTTGTTTCATCTCATATTCTCTCTGAGTGCGAACAAGAAAAGGGAAAGCGTGACGATGATCTTTCAAGTAACTGGCCTCTTACTATGCTTCGAAGATACATCCAATTCGTGAAAGGATACTTTAGACCGGTCCTGACTAAGGAGGCTGAGAAAATTATTTCAAACTATTATCAGCTTCAAAGAAGATCAGCAATGGATAACGCAGCCAGGACAACGGTACGCATGCTTGAAAGTTTGATACGCCTAGCACAAGCACATGCACGGCTCATGTTTAGAAATGAGGTTACCCGGCTTGACGCCATTACAGCTATTTTGTGCATCGAATCATCCATGACGATCTCAGCTTTAGTGGATTGTGTTGGGAATGCCTTGCACTCCAATTTTACTGAGAACCCAGATGAGGAATATGCAAAGCAAGAAATTTTGATCCTTGAGAAGCTTAAGTCGATGGACGAATTTCATGTGCTCGACTGA | 1977 | 44.51 | MDITSAAMDDPPTSPVKALATFLIRRLSDELRSIAHSPDPKLHYPLFIEFAELMDDDPSLARLVFSHPTEYLRIFDDAAVWAHKIILGDSRSCVNGIKKDFIHVRINVTGSPLESPETFPSIGSVRVKHRGVLLTLKGTVIRSGAIKMYEGERWYMCRKCKHKFPVYPELETRNSIQLPSFCPSQRAKPCEGKSFECLEGSVVRHDYQEIKIQESTQVLGVGSIPRAILVILKDDLVDLVKAGGVLSAKWSPDLKDVRCDLDPMLIANHVRRTNELKAEVDIPDDIIMKFRQFWSDFKESPLKGRNAILRGICPQVFGLFTVKLAVALTLIGGVQHVDISGTKVRGESHLLLVGDPGTGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGEWMLEAGALVLADGGLCCIDEVDSMREHDRATIHEAMEQQTISVAKAGLVTTLSTRTIVFGATNPKGHYDPEQPLSVNTTLSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILSECEQEKGKRDDDLSSNWPLTMLRRYIQFVKGYFRPVLTKEAEKIISNYYQLQRRSAMDNAARTTVRMLESLIRLAQAHARLMFRNEVTRLDAITAILCIESSMTISALVDCVGNALHSNFTENPDEEYAKQEILILEKLKSMDEFHVLD | 658 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 8054778 | 8075969 | - | Hsped.02g07330.1 | Hepe02g0733 | 562234 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe02g0733 | 658 | Pfam | MCM P-loop domain | 306 | 509 | IPR001208 | GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro) | |
| Hepe02g0733 | 658 | Gene3D | - | 288 | 616 | IPR027417 | - | |
| Hepe02g0733 | 658 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 345 | 360 | IPR001208 | GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro) | |
| Hepe02g0733 | 658 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 481 | 489 | IPR001208 | GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro) | |
| Hepe02g0733 | 658 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 403 | 417 | IPR001208 | GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro) | |
| Hepe02g0733 | 658 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 431 | 444 | IPR001208 | GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro) | |
| Hepe02g0733 | 658 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 454 | 466 | IPR001208 | GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro) | |
| Hepe02g0733 | 658 | PANTHER | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER | 16 | 641 | IPR031327 | GO:0000724(PANTHER)|GO:0003677(InterPro)|GO:0003697(PANTHER)|GO:0005524(InterPro)|GO:0005634(PANTHER)|GO:0017116(PANTHER)|GO:0032508(InterPro)|GO:0042555(PANTHER) | |
| Hepe02g0733 | 658 | Pfam | MCM AAA-lid domain | 530 | 611 | IPR041562 | - | |
| Hepe02g0733 | 658 | SUPERFAMILY | Nucleic acid-binding proteins | 43 | 253 | IPR012340 | - | |
| Hepe02g0733 | 658 | Pfam | MCM OB domain | 124 | 244 | IPR033762 | - | |
| Hepe02g0733 | 658 | CDD | MCM9 | 307 | 611 | - | - | |
| Hepe02g0733 | 658 | ProSiteProfiles | MCM family domain profile. | 304 | 507 | IPR001208 | GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro) | |
| Hepe02g0733 | 658 | SMART | mcm | 118 | 613 | IPR031327 | GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro) | |
| Hepe02g0733 | 658 | Gene3D | - | 124 | 244 | IPR012340 | - | |
| Hepe02g0733 | 658 | Gene3D | - | 149 | 205 | - | - | |
| Hepe02g0733 | 658 | SMART | AAA_5 | 346 | 495 | IPR003593 | GO:0016887(InterPro) | |
| Hepe02g0733 | 658 | FunFam | Probable DNA helicase MCM9 | 282 | 616 | - | - | |
| Hepe02g0733 | 658 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 314 | 621 | IPR027417 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe02g0733 | Hepe-Chr2:8054778 | Hepe05g1030 | Hepe-Chr5:48747756 | 1.05e-72 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe02g0733 | K10738 | - | csv:101205171 | 1197.57 |