Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0770 ATGAAATTGATCTGTATCGACATGGGAAACAGTGAAATGGAGAGAGTAACGTTGCTATTCTCACCGTTTTTGCCTTTTCTGCGCCTAATTTTGGCTTTGAGCTTCGTTTTACGGGTCTCTGCTAACAGTGAAGTTGATGCTCTAAATGCCTTGAAGTTGAGTTTGGTCGACCCCAACAATGTCTTGCAAAGTTGGAATGCCATCCTTATGAATCCCTGCACATGGTTTCATGTTACATGTGATGGAAAAGAAACTGTTTTTCGGGTTGATCTTGGCAATGCGAATCTTTCTGGAAAACTGGTTCCACAGCTTGATCAACTCACAAACTTGCGGTACTTGGAACTTTACAACAATAACATCAGTGGAACAATTCCAGAACGGTTTGGAAATTTGAAAAACTTGGAGAGCTTGGATCTTTATTCTAACAGTTTAACTGGTCCCATACCTGACACTCTGGGCAAGCTTACAAAACTAAGTACCTTGCGTCTGAACAACAATAGTTTGTCGGGAACCATTCCAATGTCTTTAACCACTGTTCCACTTCAAGTTCTGGATCTTTCAAATAACCTTCTAACAGGAGACATTCCTGTCAATGGTTCGTTTTCTCTTTTTACACCAATCAGTTTTGCTAATAATTCTCTTCACATTTCTCCCTCTGCTCCATCTCCCCCAACGATGGGTGCACCACAGACATCTTCAGGTGACGGTGCTAATGGAGTCATTGTTGGAACAATTGTTGCTGCTGCTGCTTTGCTGGTTGTTGTGCCTGCTATTGCATTTACTCTTTGGCGACGAAGAAATCCACAAGATCATTTCTTTGATGTACCTGCTGAAGAAGATCCTGAGGTTAACCTGGGGCAGCTCAAAAAATATTCTCTACGCGAGCTGCAAGTTGCCACTGATTATTTTAACCAACTGAACATTTTGGGAAAAGGTGGATTTGGCAAGGTCTATAAAGGTCGTTTGGCTGATGGTTCCCTTGTGGCTGTAAAACGATTGAAGGAGGAGCGTGCCGAGGTTGGGGACCTTCAATTTCAGACTGAAGTAGAGATGATCAGCATGGCTGTCCACCGTAATCTACTTCGTCTAAACGGGTTTTGCATGTCACCAACTGAACGATTGCTTGTCTATCCCTGTATGGCTAATGGAAGTCTAGCATCATGTTTAAGAGAGCGTAAGCAACGCCAGCCACCACTCAACTGGGCAATACGTAAGCGAGTTGCTTTAGGGGCTGCACGGGGACTTGAATATTTACACAATCATTGTGATCCTAAAATTATTCACCGTGATGTAAAAGCTGCAAATATATTATTAGATGATGAATTTGAGGCTGTTGTTGGAGATTTTGGGTTGGCTAAACTGATGAACTACAAGGATACACATGTCACAACTGCTGTTCGTGGAACAATTGGGCATATAGCACCCGAGTATCTCTCGTCTGGAAAATCTTCTGAAAAAACTGATGTTTTTGGTTATGGAGTAATGCTTCTTGAACTCGTAACTGGACAAAAAGCCTTTGATCTTGCACGGTTTGCAAAAGATGACGATGTCATGTTGCTTGATTGGGTAAAAGGACTTCTGAATGATAAGAAACTGGAAACGTTGGTCGATTCGGATCTCGGGGGCAATTACGTAGAGGAAGAACTGGAGCACCTAATTCAAGTTGCACTACTTTGCACACAAAGCTCCCCTGTGGAGAGACCTAAGATGTCAGAGGTGTTGCAAATGCTAGAAGGCAATGGTTTGGCTGAAAGATGGGAGGAATGGCAGAAAGAAGAGAGCTCACGCCAAAGCTTCAACAATATGGTCCATTCTTACCATCGGAGTAGAACTCCCCAGTTTATTGATTCCACTCCTCATATTGCTCCTGATGTGTTGTCTGGTCCAAGATGA 1893 42.89 MKLICIDMGNSEMERVTLLFSPFLPFLRLILALSFVLRVSANSEVDALNALKLSLVDPNNVLQSWNAILMNPCTWFHVTCDGKETVFRVDLGNANLSGKLVPQLDQLTNLRYLELYNNNISGTIPERFGNLKNLESLDLYSNSLTGPIPDTLGKLTKLSTLRLNNNSLSGTIPMSLTTVPLQVLDLSNNLLTGDIPVNGSFSLFTPISFANNSLHISPSAPSPPTMGAPQTSSGDGANGVIVGTIVAAAALLVVVPAIAFTLWRRRNPQDHFFDVPAEEDPEVNLGQLKKYSLRELQVATDYFNQLNILGKGGFGKVYKGRLADGSLVAVKRLKEERAEVGDLQFQTEVEMISMAVHRNLLRLNGFCMSPTERLLVYPCMANGSLASCLRERKQRQPPLNWAIRKRVALGAARGLEYLHNHCDPKIIHRDVKAANILLDDEFEAVVGDFGLAKLMNYKDTHVTTAVRGTIGHIAPEYLSSGKSSEKTDVFGYGVMLLELVTGQKAFDLARFAKDDDVMLLDWVKGLLNDKKLETLVDSDLGGNYVEEELEHLIQVALLCTQSSPVERPKMSEVLQMLEGNGLAERWEEWQKEESSRQSFNNMVHSYHRSRTPQFIDSTPHIAPDVLSGPR 630
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8495865 8503071 + Hsped.02g07700.1 Hepe02g0770 562271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0770 630 FunFam Somatic embryogenesis receptor-like kinase 1 380 597 - -
Hepe02g0770 630 ProSitePatterns Protein kinases ATP-binding region signature. 309 331 IPR017441 GO:0005524(InterPro)
Hepe02g0770 630 FunFam Somatic embryogenesis receptor kinase 1 272 379 - -
Hepe02g0770 630 Gene3D Transferase(Phosphotransferase) domain 1 380 597 - -
Hepe02g0770 630 Pfam Leucine rich repeat N-terminal domain 42 81 IPR013210 -
Hepe02g0770 630 Gene3D Phosphorylase Kinase; domain 1 272 378 - -
Hepe02g0770 630 SUPERFAMILY L domain-like 42 217 - -
Hepe02g0770 630 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 29 602 - -
Hepe02g0770 630 SUPERFAMILY Protein kinase-like (PK-like) 284 578 IPR011009 -
Hepe02g0770 630 ProSiteProfiles Protein kinase domain profile. 303 590 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g0770 630 FunFam Somatic embryogenesis receptor kinase 1 40 225 - -
Hepe02g0770 630 Pfam Protein kinase domain 304 575 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g0770 630 SMART serkin_6 303 577 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g0770 630 Pfam Leucine Rich Repeat 181 197 IPR001611 GO:0005515(InterPro)
Hepe02g0770 630 Gene3D Ribonuclease Inhibitor 40 221 IPR032675 -
Hepe02g0770 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 426 438 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g0770 630 Pfam Leucine rich repeat 108 168 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0118 Hepe-Chr1:14645663 Hepe02g0770 Hepe-Chr2:8495865 1.46e-54 dispersed
Hepe02g0770 Hepe-Chr2:8495865 Hepe06g0141 Hepe-Chr6:5131041 5.33e-242 dispersed
Hepe03g0872 Hepe-Chr3:30403257 Hepe02g0770 Hepe-Chr2:8495865 4.28e-58 dispersed
Hepe02g0770 Hepe-Chr2:8495865 Hepe07g0324 Hepe-Chr7:3259241 5.43e-248 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72539 PF00069 Pkinase 2.20E-45 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0770 K13416 - csv:101216386 1028.47