Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0777 ATGGCCAAGTTGGTGATTCTCAATCTCTTGATCTTCCTCAGTAGTTTTGCAGCCATTTCTCAAGGCCAATTGAGGTTTGGGTTTTATGCTCGAACTTGTCCTCCTGCCGAGTCCATTGTTCGTTCCGTCGTAACCGATGCCGTTCGCAACAATGCCAACAACGCTGCCGTATTGCTCCGTCTCCATTTCCACGATTGCTTCGTCGAGGGTTGCGACGGTTCGATCTTGATCGACAATGTGCCGAACCCCGAAAAAAAGGCTTTTGGGCATCAAGGGGTAGGGGGTTTTGATGTAATAGAGATAGCAAAAGGAGCATTGGAAGCACGATGTCCAGGGGTGGTTTCTTGTGCTGACATAGTCGCTATGGCTGCTAGAGACGCCATTGTTATGGCAAATGGACCGGAGTACGAAGTTCTCACCGGACGGAGAGACGGTAGGGTTTCGGAGGTTTCTCTGGCCGATGAGCTGCCGGATGTGAGTGATTCAGTTCAAGTTTTGAAGAACAAATTTGCTCAGAAAGGGATGTCTGACAAGGACTTGGTTTTACTCAGTGCGGCACACACAATCGGTACAACGGCATGCTTCTTCATGACAAAACGCCTCTACGACTTCTTCCCGGGCGGCGGCGGCGGCGGATCAGACCCGGACATAAGTCCAGCGATGCTGCCAGAGCTGAAGTCTCAATGCCCTCGAAACGGCGACGTCAACGTCCGCCTTGCCATAGACCGCATGAGCCCCCGCACCTTTGACATTAACATTCTCCAAAACATCAGAGATGGCTTCGCCGTCCTCGCCTCCGACGCCCGCCTTAACGACGATGCATCTACCCGAGCCGTGATCGACTCCTACTTAAGTCCCCTGGCCCCCATTCTTGGCCCCTCATTTCCCGACGATTTTGTCAACTCCATGGTTAAAATGGGCCAAATTGGGACCAAAACTGGCTTCCAAGGAGAGATTCGAAGGGTTTGTTCTGCTTTTAACTCAAGGTAA 990 51.72 MAKLVILNLLIFLSSFAAISQGQLRFGFYARTCPPAESIVRSVVTDAVRNNANNAAVLLRLHFHDCFVEGCDGSILIDNVPNPEKKAFGHQGVGGFDVIEIAKGALEARCPGVVSCADIVAMAARDAIVMANGPEYEVLTGRRDGRVSEVSLADELPDVSDSVQVLKNKFAQKGMSDKDLVLLSAAHTIGTTACFFMTKRLYDFFPGGGGGGSDPDISPAMLPELKSQCPRNGDVNVRLAIDRMSPRTFDINILQNIRDGFAVLASDARLNDDASTRAVIDSYLSPLAPILGPSFPDDFVNSMVKMGQIGTKTGFQGEIRRVCSAFNSR 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8590401 8596266 - Hsped.02g07770.1 Hepe02g0777 562278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0777 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 179 189 IPR019793 -
Hepe02g0777 329 CDD secretory_peroxidase 23 326 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Hepe02g0777 329 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g0777 329 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g0777 329 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g0777 329 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g0777 329 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g0777 329 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g0777 329 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g0777 329 PRINTS Plant peroxidase signature 178 190 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g0777 329 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g0777 329 Gene3D Peroxidase, domain 2 157 306 - -
Hepe02g0777 329 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g0777 329 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g0777 329 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g0777 329 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g0777 329 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g0777 329 SUPERFAMILY Heme-dependent peroxidases 23 327 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g0777 329 FunFam Peroxidase 157 306 - -
Hepe02g0777 329 ProSiteProfiles Plant heme peroxidase family profile. 23 327 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g0777 329 PANTHER PEROXIDASE 25-RELATED 18 323 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Hepe02g0777 329 Pfam Peroxidase 40 283 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g0777 329 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601(InterPro)
Hepe02g0777 329 FunFam Peroxidase 27 174 - -
Hepe02g0777 329 Gene3D - 27 327 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0777 Hepe-Chr2:8590401 Hepe09g0681 Hepe-Chr9:6453315 3.41e-88 dispersed
Hepe02g0777 Hepe-Chr2:8590401 Hepe08g0477 Hepe-Chr8:4193591 2.56e-70 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0777 K00430 - csv:101221831 494.197