Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g0787 | ATGGATCAATCAGAGCGTTCTCAGCATCAGCAACAATCACAGCAGACTGCAGGCCAAATACCATATTCTAATCCTTACCAAACAGCTCCGATGGTGGCTTCCGGAACTCCTTCTATTACGATTCCCCCGACTCAGCCACCATCCAGTTTCTCTAATTCTCCACACCAGCTTGCCTATCAGCAGGCACAGCATTTCCACCACCAGCAACAGCAGCAGCAGCAGCAACAGCTCCAAATGTTTTGGGCAAACCAAATTCAAGAGATTGAACAAACATCTGACTTCAAGAACCACAGTCTTCCCCTTGCTCGAATCAAGAAAATAATGAAAGCGGATGAAGACGTCCGAATGATTTCAGCTGAAGCACCAGTTATATTCGCAAAGGCGTGTGAAATGTTCATCTTGGAATTGACTCTGCGATCCTGGATTCATACAGAAGAGAACAAAAGGAGAACTTTACAGAAGAATGATATTGCAGCTGCAATTTCAAGGACCGATGTCTTCGATTTTTTGGTTGATATTATTCCTAGAGATGAACTGAAAGAGGAAGGTCTCGGAATCACGAAAGCTTCTATTCCCGTAGTTGGTTCCCCTGCTGATCTTCCTTATTACTATGTTCCATCGCAGCATCCGGTGGGTGCTACAGGGATGATTATGGGGAAGCAATTAGATCAAGCAAATATGTACGGTGCCACTGCTCAACAGCCCCGACCTCCGATGCCTTTCATGCCGTGGCCGCATACCCAACCTCAGCAGCAGCAACAAACTCAGCAGGAAAGTGACGGATAG | 786 | 46.31 | MDQSERSQHQQQSQQTAGQIPYSNPYQTAPMVASGTPSITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQPRPPMPFMPWPHTQPQQQQQTQQESDG | 261 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 8894504 | 8895289 | - | Hsped.02g07870.1 | Hepe02g0787 | 562288 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g0787 | 261 | MobiDBLite | consensus disorder prediction | 246 | 261 | - | - | |
Hepe02g0787 | 261 | Gene3D | Histone, subunit A | 59 | 176 | IPR009072 | GO:0046982(InterPro) | |
Hepe02g0787 | 261 | PANTHER | HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED | 78 | 208 | IPR050568 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0005634(PANTHER)|GO:0006357(PANTHER) | |
Hepe02g0787 | 261 | MobiDBLite | consensus disorder prediction | 1 | 71 | - | - | |
Hepe02g0787 | 261 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
Hepe02g0787 | 261 | MobiDBLite | consensus disorder prediction | 50 | 71 | - | - | |
Hepe02g0787 | 261 | MobiDBLite | consensus disorder prediction | 231 | 261 | - | - | |
Hepe02g0787 | 261 | FunFam | Nuclear transcription factor Y subunit gamma | 64 | 176 | - | - | |
Hepe02g0787 | 261 | SUPERFAMILY | Histone-fold | 55 | 170 | IPR009072 | GO:0046982(InterPro) | |
Hepe02g0787 | 261 | Pfam | Core histone H2A/H2B/H3/H4 | 51 | 161 | IPR007125 | GO:0003677(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g0787 | Hepe-Chr2:8894504 | Hepe09g1825 | Hepe-Chr9:57828189 | 3.45e-81 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
54991 | PF00125 | Histone | 1.00E-18 | CL0012 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g0787 | K08066 | - | csv:101213813 | 390.963 |