Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0824 ATGGCTTCATTCCATGCAGAAGCTGCTTGTGAGTCTGGAAGTGCTGTTGATTATGCTCAACGAGCTCAGTGGCTCCGAGCAGCGATTCTCGGGGCCAACGACGGGCTTGTCTCCGTTGCGTCGCTGATGATGGGCGTCGGAGCTGTCAAGCCCGACGCCAAAGCCATGCTTATTGCCGGATTTGCCGGGCTGGTTGCTGGGGCTTGCAGCATGGCGATCGGAGAGTTCGTGTCGGTTTACACCCAATATGATATAGAGAAGGCTCAGCTGAAGAGGGATGGGAAGCAAAAGAATAATGGCATGGAACCGAACCACCCCGCGGCGGAGGAAGAGAAGCTGCCAAATCCATTCCAGGCTGCGCTCGCGTCGGCGATTGCGTTTTCGGTTGGAGCAGTCATTCCTTTGCTGGCAGCGGTGTTTATCCGAGACCATAAGTTAAAAAAGGAGTTCCCTTTATCAGTCTAA 465 54.19 MASFHAEAACESGSAVDYAQRAQWLRAAILGANDGLVSVASLMMGVGAVKPDAKAMLIAGFAGLVAGACSMAIGEFVSVYTQYDIEKAQLKRDGKQKNNGMEPNHPAAEEEKLPNPFQAALASAIAFSVGAVIPLLAAVFIRDHKLKKEFPLSV 154
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9660085 9661632 + Hsped.02g08240.1 Hepe02g0824 562325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0824 154 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 16 147 IPR008217 GO:0005381(PANTHER)|GO:0005384(PANTHER)|GO:0005384(InterPro)|GO:0006880(PANTHER)|GO:0016020(PANTHER)|GO:0030026(InterPro)|GO:0030026(PANTHER)
Hepe02g0824 154 Pfam VIT family 108 142 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Hepe02g0824 154 Pfam VIT family 25 99 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0824 Hepe-Chr2:9660085 Hepe10g1971 Hepe-Chr10:56732704 7.69e-51 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0824 K22736 - csv:101214875 246.514