Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0921 ATGCTCCTCCTCCCTCCATCTGCTTCTTCCTCAACTGCACGAGAGAACTCGTTTGCTCGACTCAATCGACCGAGATTGGATTCGACTCACTTGACAACAATGAGGTTGTTTGTTTCAGCTGTCTTCCTTTTTGTCATATTTTCTTGTGGAGCTGCGTACGATCCGTTGGATCCGAATGGGAACATTACGATCAAATGGGACGTCATGTCATGGACGTCTGACGGTTATGTGGCGACTGTGACGTTGAACAACTTCCAAATGTACCGGCACATAATGAGTCCTGGATGGACGATGGGGTGGACGTGGGCGAAAAAGGAAGTGATATGGTCGATGGTGGGGTCGCAGACGACGGAGCAAGGCGACTGCTCCAAGTTCAAAGGAAATATTCCTCACTGTTGTAAGAAAAACCCCACTGTTGTGGATTTGATGCCTGGAGTACCTTACAACCAACAGTTTACAAACTGCTGCAAAGGTGGGGTTGTGGCTGCTTGGGGACAAGACCCTCAAGCTGCTGTTTCAGCCTTTCAGCTCAGTATTGGCCAAGCAGGTACTTCAAACAAGACTGTCAAACTCCCCAAGAACTTCACTTTGCTCGGTCCCGGCCCCGGATACACTTGTGGCCCTGCCAAGGTCGTCCCTTCAACCGCCTTCCTCACGCCCGATCGTCGTCGCAAAACTCAAGCTCTGATGACTTGGAATGTGACTTGCACTTACTCTCAATTTCTGGCCAGAAAGAACCCTAATTGTTGTGTTTCTTTCTCGTCTTTCTACAACGATACGATCACATCATGTCCGTCTTGCACTTGTGGTTGCCAAAACAAGAACAACTGCGTCAAGAGTGATTCTAAGATTCTGAAGCTGGTTGGACTGAATACACCGAAGAAAGACAATGCCCCGTTGCTACAGTGCACACATCATATGTGCCCAGTTCGAGTTCACTGGCATGTGAAGCAAAATTACAAGGAATATTGGCGGGTGAAGATCGCCATCACAAATTTCAACTACCGGATGAACTATTCGCTTTGGTCTCTCGTCGTTCAGCACCCGAATCTGAACAATGTAACCCAAGTTTTCAGCTTTGACTACAAACCCCTTGTTCCCTATGAATCAATCAATGACACAGGAATGTTTTACGGGACGAAGTTCTACAACGACCTTCTGATGGAAGCGGGGCCATTTGGGAATGTACAGTCGGAGGTGTTGCTGCAAAAGGACCAGAACACCTTCACCTTCAAGCAGGGATGGGCATTTCCTCGAAAAGTTTACTTCAATGGAGACGAGTGCATGCTTCCCCCACCCGACACATACCCATTCCTGCCCAACGCCGCCCACCAAAGGCCCATTGCCCTCTCAACTTCAATTGCTTTGCTGCTGCTCTTCCTGCTACTAGCTATTTGCTGA 1401 48.54 MLLLPPSASSSTARENSFARLNRPRLDSTHLTTMRLFVSAVFLFVIFSCGAAYDPLDPNGNITIKWDVMSWTSDGYVATVTLNNFQMYRHIMSPGWTMGWTWAKKEVIWSMVGSQTTEQGDCSKFKGNIPHCCKKNPTVVDLMPGVPYNQQFTNCCKGGVVAAWGQDPQAAVSAFQLSIGQAGTSNKTVKLPKNFTLLGPGPGYTCGPAKVVPSTAFLTPDRRRKTQALMTWNVTCTYSQFLARKNPNCCVSFSSFYNDTITSCPSCTCGCQNKNNCVKSDSKILKLVGLNTPKKDNAPLLQCTHHMCPVRVHWHVKQNYKEYWRVKIAITNFNYRMNYSLWSLVVQHPNLNNVTQVFSFDYKPLVPYESINDTGMFYGTKFYNDLLMEAGPFGNVQSEVLLQKDQNTFTFKQGWAFPRKVYFNGDECMLPPPDTYPFLPNAAHQRPIALSTSIALLLLFLLLAIC 466
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11095838 11097705 + Hsped.02g09210.1 Hepe02g0921 562422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0921 466 PIRSF COBRA 26 466 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Hepe02g0921 466 PANTHER PROTEIN COBRA 37 459 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)|GO:0046658(PANTHER)|GO:0052324(PANTHER)
Hepe02g0921 466 Pfam COBRA-like protein 76 239 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0448 Hepe-Chr2:4301509 Hepe02g0921 Hepe-Chr2:11095838 2.67e-134 dispersed
Hepe02g0921 Hepe-Chr2:11095838 Hepe09g0286 Hepe-Chr9:2451841 4.96e-280 dispersed
Hepe02g0921 Hepe-Chr2:11095838 Hepe02g0922 Hepe-Chr2:11097950 2.48e-220 tandem
Hepe01g1303 Hepe-Chr1:78236816 Hepe02g0921 Hepe-Chr2:11095838 6.22e-40 transposed
Hepe02g0921 Hepe-Chr2:11095838 Hepe07g2448 Hepe-Chr7:68827158 1.10e-215 wgd
Hepe02g0921 Hepe-Chr2:11095838 Hepe09g0285 Hepe-Chr9:2448414 6.09e-238 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0921 - - - 0.0