Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0922 ATGGCTCTTCCCATTTTCAGATTACCCTCTCTCTTTGCCCTTCTCCCCATTTTTCTTGCCTTCTCCAGCTTTCTTACTTCAACAGAAGCATATGATCCACTTGACCCAAATGGAAACATTACTGTCAAATGGGATGTTATAAGCTGGACCCCTGATGGCTATATTGCTGTTGTTACTATGTATAATTTCCAACTATATCGTCATATTCAAACACCGGGATGGTCCCTGCAATGGACATGGGCGAAGAAAGAGGTCATATGGAGCATGTTGGGAGGCCAAGCAACAGAACAAGGCGATTGTTCTAGATACAAAGGGAACGTCCCCCATTGCTGCAAGAAGGATCCAACCGTTGTCGATCTATTGCCCGGAACTCCTTATAACCAGCAGATTGCAAATTGCTGCAAAGGTGGAGTTCTTAACTCGTGGGTGCAAGATCCAGTTTCTGCAGTGAGTTCATTTCAGCTCAGTGTTGGTGCAGCCGGAACCTCGAATAAAACTGTCCGACTGCCGAAGAACTTCACCTTAAAAGCACCTGGGCCTGGTTATACTTGTGGACCTGCAAAAATTGTTAAACCAACCAGATTCATTTCCTCGGACAAACGGAGAGTTACACAGGCCTTGATGACATGGAATATTACATGCACGTATTCACAATTTCTGGCCCAAAAAACTCCGACTTGCTGTGTCTCGCTGTCGGCGTTTTACAACGATACCATTGTTTCTTGCCCAAAATGCTCATGTGGCTGCCAAAACAACTTGAACGGACCCCAAAGTTGTATGGAGCCAAATTCTCCGCATTTAGCCTCTGTTGTTACCGGTGCTAGTTCTAGGAAGAACAATTTGACACCTTTGGTTCAGTGTACCAGCCATATGTGCCCAATCCGTATTCACTGGCATGTGAAGATTAACTATAAGGAGTACTGGCGTGTGAAGATCACAATTACAAACTTCAATTATATGATGAACTATTCAAATTGGAACTTAGTTGTCCAACATCCCAACTTCGACAATCTAACGCAGATTTTCAGCTTCAACTACGAGTCAATCAATCCTTATGGAATGATAAGTAGGATACATTCTCTTTTTATCTCTCATGATCGGAATTTGGAAACATCTCACTTCCATTTTTGTTACTATTCTTTTAAATTTAAATTGATGTATAATAAAATGTGTTTTCGACCAGATGATACTGCAATCCTGTGGGGAGTCAAGTTCTACAACGATTTTCTCATGCAAGCAGGCCCTCTTGGGAATGTGCAGACAGAGTTACTTTTCCAGAAGGATCAATCGACTTTCACATTTGATAAAGGCTGGGCTTTCCCTCGAAGGATCTATTTCAATGGCGACAATTGTGTCATGCCGCCTCCAGATGCCTATCCCTACTCACCGAACACGGGTTATGGGCAAGGTGTCTCATTGTTTACTACGCTATTGTTGATTTCCTTGACTCTCTTGTCGTTTCACCATTCATTTGCATAA 1479 42.73 MALPIFRLPSLFALLPIFLAFSSFLTSTEAYDPLDPNGNITVKWDVISWTPDGYIAVVTMYNFQLYRHIQTPGWSLQWTWAKKEVIWSMLGGQATEQGDCSRYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPVSAVSSFQLSVGAAGTSNKTVRLPKNFTLKAPGPGYTCGPAKIVKPTRFISSDKRRVTQALMTWNITCTYSQFLAQKTPTCCVSLSAFYNDTIVSCPKCSCGCQNNLNGPQSCMEPNSPHLASVVTGASSRKNNLTPLVQCTSHMCPIRIHWHVKINYKEYWRVKITITNFNYMMNYSNWNLVVQHPNFDNLTQIFSFNYESINPYGMISRIHSLFISHDRNLETSHFHFCYYSFKFKLMYNKMCFRPDDTAILWGVKFYNDFLMQAGPLGNVQTELLFQKDQSTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPYSPNTGYGQGVSLFTTLLLISLTLLSFHHSFA 492
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11097950 11101105 - Hsped.02g09220.1 Hepe02g0922 562423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0922 492 PIRSF COBRA 363 492 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Hepe02g0922 492 PIRSF COBRA 4 366 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Hepe02g0922 492 PANTHER PROTEIN COBRA 20 480 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)|GO:0046658(PANTHER)|GO:0052324(PANTHER)
Hepe02g0922 492 Pfam COBRA-like protein 54 217 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0922 Hepe-Chr2:11097950 Hepe09g0285 Hepe-Chr9:2448414 1.38e-264 dispersed
Hepe02g0921 Hepe-Chr2:11095838 Hepe02g0922 Hepe-Chr2:11097950 2.48e-220 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0922 - - - 0.0