Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g0930 | ATGCCTGCAGAAAAACATGATGAGAGACATAAGATGATTACAAATTCAAAAGAAGAGAATTCACCTCCAAAACTAGCGGCAGCATCTTCATCAAGCTCATCGGCGGCATCGCCATGGCTTAGGCTGAAGGATCCGAGGATCGTGCGCGTGTCGCGAGCTTTCGGAGGCAAGGATCGACACAGCAAAGTTTGTACCATAAGAGGGCTGCGCGACAGGCGCGTAAGGCTTTCGGTTTCAACCGCAATTCAGCTCTATGATCTTCAGGACCGCCTCGGCCTTAACCAGCCGAGCAAGGTCGTCGACTGGTTGCTCAATGTCGCCAAGGATGAAATCGACGAGCTCCCTCCATTGCCAATCCCATCTGCAAGCCTCGGCCTTCACTACCAATCCATGCTACCACCTCACACCCCGACACACCCGCATAGGTCGTCGGAGTTCAAAATCAACTGCAATAATAATAACGGCATCGACAAGGCCAACGACGAAGCCGAGCACGCCCCGGAACAAAAGCAACAACATAAATCCAATGCTAATCCCTCTCACCCTTCTTCCTTCTCAGCCCTTTTGAACAATGTGGCAGCTCCCCCTTCATTTGGTTATCATCATCATTGGGAGCCATCATCAACAAATCTTCCATTCTTTACATCTCAAGCTGAGGATCTTCATAACTTCAATAATGTCAATTTGTCTTTGCCTTCCCCTTTGTCTCTCTCAACTGGCTCTCAATATTTAGACTTCAATCATCACTTGCACCAAAATTTCTTGATTAACAATTCTCTCACACATCCTTTGCACTCAATAAACCAATCGGCTGTTAGGCCTTTCCATTTCAGTATGGCTCCCAAATTCGCTTCTCAAGAGATCAAGAATAACAATGGAGATCCAGCAAATAAGGATGATGATGATGGGTTTGGTTCTGATGATCATGAATGA | 933 | 46.73 | MPAEKHDERHKMITNSKEENSPPKLAAASSSSSSAASPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASLGLHYQSMLPPHTPTHPHRSSEFKINCNNNNGIDKANDEAEHAPEQKQQHKSNANPSHPSSFSALLNNVAAPPSFGYHHHWEPSSTNLPFFTSQAEDLHNFNNVNLSLPSPLSLSTGSQYLDFNHHLHQNFLINNSLTHPLHSINQSAVRPFHFSMAPKFASQEIKNNNGDPANKDDDDGFGSDDHE | 310 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 11222787 | 11224633 | + | Hsped.02g09300.1 | Hepe02g0930 | 562431 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g0930 | 310 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
Hepe02g0930 | 310 | Pfam | TCP family transcription factor | 56 | 176 | IPR017887 | - | |
Hepe02g0930 | 310 | PANTHER | TRANSCRIPTION FACTOR TCP4-RELATED | 20 | 266 | IPR005333 | GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0043565(PANTHER)|GO:2000032(PANTHER) | |
Hepe02g0930 | 310 | MobiDBLite | consensus disorder prediction | 172 | 188 | - | - | |
Hepe02g0930 | 310 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
Hepe02g0930 | 310 | MobiDBLite | consensus disorder prediction | 133 | 188 | - | - | |
Hepe02g0930 | 310 | MobiDBLite | consensus disorder prediction | 286 | 310 | - | - | |
Hepe02g0930 | 310 | MobiDBLite | consensus disorder prediction | 143 | 157 | - | - | |
Hepe02g0930 | 310 | MobiDBLite | consensus disorder prediction | 293 | 310 | - | - | |
Hepe02g0930 | 310 | MobiDBLite | consensus disorder prediction | 18 | 37 | - | - | |
Hepe02g0930 | 310 | ProSiteProfiles | TCP domain profile. | 56 | 114 | IPR017887 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g0930 | Hepe-Chr2:11222787 | Hepe04g2008 | Hepe-Chr4:74879838 | 4.76e-26 | dispersed | |
Hepe02g0930 | Hepe-Chr2:11222787 | Hepe07g2456 | Hepe-Chr7:68894740 | 1.62e-32 | wgd | |
Hepe02g0930 | Hepe-Chr2:11222787 | Hepe09g0277 | Hepe-Chr9:2386310 | 1.50e-36 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55001 | PF03634 | TCP | 3.00E-28 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g0930 | - | - | - | 0.0 |