Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0930 ATGCCTGCAGAAAAACATGATGAGAGACATAAGATGATTACAAATTCAAAAGAAGAGAATTCACCTCCAAAACTAGCGGCAGCATCTTCATCAAGCTCATCGGCGGCATCGCCATGGCTTAGGCTGAAGGATCCGAGGATCGTGCGCGTGTCGCGAGCTTTCGGAGGCAAGGATCGACACAGCAAAGTTTGTACCATAAGAGGGCTGCGCGACAGGCGCGTAAGGCTTTCGGTTTCAACCGCAATTCAGCTCTATGATCTTCAGGACCGCCTCGGCCTTAACCAGCCGAGCAAGGTCGTCGACTGGTTGCTCAATGTCGCCAAGGATGAAATCGACGAGCTCCCTCCATTGCCAATCCCATCTGCAAGCCTCGGCCTTCACTACCAATCCATGCTACCACCTCACACCCCGACACACCCGCATAGGTCGTCGGAGTTCAAAATCAACTGCAATAATAATAACGGCATCGACAAGGCCAACGACGAAGCCGAGCACGCCCCGGAACAAAAGCAACAACATAAATCCAATGCTAATCCCTCTCACCCTTCTTCCTTCTCAGCCCTTTTGAACAATGTGGCAGCTCCCCCTTCATTTGGTTATCATCATCATTGGGAGCCATCATCAACAAATCTTCCATTCTTTACATCTCAAGCTGAGGATCTTCATAACTTCAATAATGTCAATTTGTCTTTGCCTTCCCCTTTGTCTCTCTCAACTGGCTCTCAATATTTAGACTTCAATCATCACTTGCACCAAAATTTCTTGATTAACAATTCTCTCACACATCCTTTGCACTCAATAAACCAATCGGCTGTTAGGCCTTTCCATTTCAGTATGGCTCCCAAATTCGCTTCTCAAGAGATCAAGAATAACAATGGAGATCCAGCAAATAAGGATGATGATGATGGGTTTGGTTCTGATGATCATGAATGA 933 46.73 MPAEKHDERHKMITNSKEENSPPKLAAASSSSSSAASPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASLGLHYQSMLPPHTPTHPHRSSEFKINCNNNNGIDKANDEAEHAPEQKQQHKSNANPSHPSSFSALLNNVAAPPSFGYHHHWEPSSTNLPFFTSQAEDLHNFNNVNLSLPSPLSLSTGSQYLDFNHHLHQNFLINNSLTHPLHSINQSAVRPFHFSMAPKFASQEIKNNNGDPANKDDDDGFGSDDHE 310
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11222787 11224633 + Hsped.02g09300.1 Hepe02g0930 562431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0930 310 MobiDBLite consensus disorder prediction 1 37 - -
Hepe02g0930 310 Pfam TCP family transcription factor 56 176 IPR017887 -
Hepe02g0930 310 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 20 266 IPR005333 GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0043565(PANTHER)|GO:2000032(PANTHER)
Hepe02g0930 310 MobiDBLite consensus disorder prediction 172 188 - -
Hepe02g0930 310 MobiDBLite consensus disorder prediction 1 17 - -
Hepe02g0930 310 MobiDBLite consensus disorder prediction 133 188 - -
Hepe02g0930 310 MobiDBLite consensus disorder prediction 286 310 - -
Hepe02g0930 310 MobiDBLite consensus disorder prediction 143 157 - -
Hepe02g0930 310 MobiDBLite consensus disorder prediction 293 310 - -
Hepe02g0930 310 MobiDBLite consensus disorder prediction 18 37 - -
Hepe02g0930 310 ProSiteProfiles TCP domain profile. 56 114 IPR017887 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0930 Hepe-Chr2:11222787 Hepe04g2008 Hepe-Chr4:74879838 4.76e-26 dispersed
Hepe02g0930 Hepe-Chr2:11222787 Hepe07g2456 Hepe-Chr7:68894740 1.62e-32 wgd
Hepe02g0930 Hepe-Chr2:11222787 Hepe09g0277 Hepe-Chr9:2386310 1.50e-36 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55001 PF03634 TCP 3.00E-28 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0930 - - - 0.0