Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0947 ATGAAGAACAACTTCTTAACCTTCTTCTCTTCCTCTCTTCTTCTCACAGCTTTCTTCAACATCTCTCCATCTTTCTGCACATACGAAGATTGCTCCGCCGTGTTCAACTGCGGCGATATCGTCAACGTCGGCTTCCCTTTCTGGGGCGAAAATCGTCCGCCGAACTGCGGGATTCCTGAACTGAAACTCACCTGCGACGATAACGTCACCGAGATTGAGATCATGCAAGTGAAGTATAGGGTTTTGCAGGTGAATCCGAGCACCCAAACGCTGAGAATCGCACGAGACGACTATTTCAATGGAATCTGCCCAGAAACCCATCTGAAGAACACGACCCTCGATCCAAATCTCTTCGAAATCAGCAATGGGTACGTGAATCTAACACTACTTTATGGGTGTGATTTATCAGTTTTGGTTATTCCCGAGCATTTGAGATTCGGGTGTCCCATTCATGGAGATGGGTTTGTGAAGCTTGGGGAAGAATTGGGGCTATGGCGCTGCAAGGCCAGCGTGGTAGTTCCTGTTGGTGGCGTCGGCGATGAGGAGATTTTGGTTGGAGTTTTGAAGATGGAAGAAGCCATTAGAGAAGGGTTTGAGGTGAAATGGAAGGTGGAGATTGGGGGTTGTGGTGGTGAATGTGTGGAGTCTGGTGGCGTTTGTGGTTATGATTTGAAGCTCCGCCGTGGGATGTGTTTATGTGAGAGTGAATTTTCTTCTTCTTCTTCTTCTCCAGTGGAAGTTTGTCGGAGGGACGGTGGTGGCGCCGCCGTCCGCGATCATTCGTCTGCTTCTGCTCCCAAGCCAGGTGGGAATGAATCCAAGAAAACACACCTGCTAATAGGCCTTTCTGTTGGAGGGGCAACTGTATTAGGCCTATGCCTAGGATGCTGTGTCTTCTACATTACACAACAACGAAAGAAAAAACATGTCCTGATATTGAAAAACAAAGATCTTTCCTTTTCGCCTCCTTCAAGTGCAGGCATTTTGACTCCCTCGACGCTTCGCTCTAATACCATTCCTTCCTATCCTTATTCGAGATCCGATCTCGAGAATGGGAGCTCCTACTTCGGAGCTCAAGTCTTTACCTATGTTGAACTTGAGGAAGCAACTCATAGTTTTGACCCTTCAAGGGAGCTTGGAGATGGAGGTTATGGTACTGTTTACTCTGGAACACTCAAGGATGGACGGATAGTTGCAGTAAAGCGGCTATACGAAAACAACTATAAACGCGTCGAGCAGTTCATGAATGAAGTCGAGATTCTATCGCGATTGCAACACCCGAACCTGGTGAAGCTTTACGGATGCACATCAAGACATAGTCGGGAACTCCTCCTAGTATATGAATACATTCCCAATGGAACAGTGGCTGACCATCTACATGGAAACCGAGCAAATTCAGGTCTACTCAGTTGGTCTGTTAGGCTGAAGATTGCTATAGAGACTGCTAATGCACTGGCTTACCTCCATCGAAAAGAAATCATTCATCGCGACGTCAAAACCAACAACATTCTCCTAGACAACAACTTCAAAGTAAAAGTCGCCGATTTCGGCCTGTCGCGGTTATTTCCCGTCGACGTTACTCATGTGTCAACCGCTCCACAAGGAACACCAGGCTACGTTGATCCTGAGTATTACCAATGCTACCAACTTACCGACAAGAGTGACGTGTATAGCTTTGGAGTAGTTTTGGTTGAGCTTATATCATCGCTGCAAGCAGTTGACATCAACAGGAAAAGAAACGATATCAATTTGTTTAATATGGCTATCGATAGAATTCAAAATCAGGCGTTACGTGATTTAGTAGATCCAGATCTTGGATTTGAGAGGGATTATGCTGTAAGATCTATGATAACATCAGTGGCCGAGTTGGCGTTTCGATGTCTTCAAGAGGCAAGGGATCTGAGGCCTTCTATGGATGAAGTGTTGGAGGTTTTGAGAGAATTGGAGAATGAAGAACTGGCTGCTCGTAAAGCTGAAGTGTTGGATATTGGGTCTGATAATGTGAGGCTTTTAAGGAATACATCTCTGCTTTCACCAGATTCTGGACCAGTGACTGATAAATGGATGAAGGTCTTGAACAGAACAACTTAA 2091 45.77 MKNNFLTFFSSSLLLTAFFNISPSFCTYEDCSAVFNCGDIVNVGFPFWGENRPPNCGIPELKLTCDDNVTEIEIMQVKYRVLQVNPSTQTLRIARDDYFNGICPETHLKNTTLDPNLFEISNGYVNLTLLYGCDLSVLVIPEHLRFGCPIHGDGFVKLGEELGLWRCKASVVVPVGGVGDEEILVGVLKMEEAIREGFEVKWKVEIGGCGGECVESGGVCGYDLKLRRGMCLCESEFSSSSSSPVEVCRRDGGGAAVRDHSSASAPKPGGNESKKTHLLIGLSVGGATVLGLCLGCCVFYITQQRKKKHVLILKNKDLSFSPPSSAGILTPSTLRSNTIPSYPYSRSDLENGSSYFGAQVFTYVELEEATHSFDPSRELGDGGYGTVYSGTLKDGRIVAVKRLYENNYKRVEQFMNEVEILSRLQHPNLVKLYGCTSRHSRELLLVYEYIPNGTVADHLHGNRANSGLLSWSVRLKIAIETANALAYLHRKEIIHRDVKTNNILLDNNFKVKVADFGLSRLFPVDVTHVSTAPQGTPGYVDPEYYQCYQLTDKSDVYSFGVVLVELISSLQAVDINRKRNDINLFNMAIDRIQNQALRDLVDPDLGFERDYAVRSMITSVAELAFRCLQEARDLRPSMDEVLEVLRELENEELAARKAEVLDIGSDNVRLLRNTSLLSPDSGPVTDKWMKVLNRTT 696
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11446527 11465377 + Hsped.02g09470.1 Hepe02g0947 562448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0947 696 ProSiteProfiles Protein kinase domain profile. 373 653 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g0947 696 Gene3D Transferase(Phosphotransferase) domain 1 450 662 - -
Hepe02g0947 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 493 505 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g0947 696 Pfam Protein kinase domain 376 643 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g0947 696 SMART serkin_6 373 645 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g0947 696 FunFam WAK1-OsWAK receptor-like cytoplasmic kinase (OsWAK-RLCK) 345 449 - -
Hepe02g0947 696 Pfam Wall-associated receptor kinase C-terminal 166 235 IPR032872 -
Hepe02g0947 696 Gene3D Phosphorylase Kinase; domain 1 346 449 - -
Hepe02g0947 696 Pfam Wall-associated receptor kinase galacturonan-binding 31 95 IPR025287 GO:0030247(InterPro)
Hepe02g0947 696 ProSitePatterns Protein kinases ATP-binding region signature. 379 401 IPR017441 GO:0005524(InterPro)
Hepe02g0947 696 MobiDBLite consensus disorder prediction 251 273 - -
Hepe02g0947 696 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 27 689 IPR044652 GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER)
Hepe02g0947 696 SUPERFAMILY Protein kinase-like (PK-like) 354 648 IPR011009 -
Hepe02g0947 696 CDD STKc_IRAK 379 648 - -
Hepe02g0947 696 FunFam Wall-associated receptor kinase-like 20 450 658 - -
Hepe02g0947 696 Coils Coil 638 658 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0947 Hepe-Chr2:11446527 Hepe02g3428 Hepe-Chr2:83656455 9.10e-192 dispersed
Hepe02g0946 Hepe-Chr2:11439939 Hepe02g0947 Hepe-Chr2:11446527 9.29e-75 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72546 PF00069 Pkinase 5.00E-50 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0947 - - - 0.0