Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g0971 | ATGGTTCAGCCGAAATTGCGATGGGGGGAGCTCGACGACGACGATGGAGATCTTGATTTTCTCCTTCCGCCGAAGCAAATTATCGGGCCAGACGTAAATGGGTTGAAGAAAACTATTGAGTATCAGTTCAACGAAGATGGTAACAAGGTCAAAATCATAACCACCTCTCGTACTCGCAAGCTCGCCCATGCTCGCCTGAGTAAACATGCCGTGGAGCGCCGATCTTGGCCCAAGTTCGGCGATGCTGTCCATGAAGATGTCGGCAGTAGGCTCACTATGGTCTCCACTGAGGAGATTCTTCTCGAGCGCCCTCGTGCTCCTGGTAGCAAACCAGAGGAGCCAAAGGTTGCTGGAGACCCTCTAGCCCAACTTGGAAAAGGAGGAGCTGTTCTTATGGTCTGTCGAACTTGTGGTAAAAAGGGTGATCACTGGACCTCTAGATGCCCTTACAAGGACCTGGTACCACAAGCTGATGGATTGGATAAGACTGTTGCACCAGAGGCGACAACTGCTGCTCCTGCTGCAACGAAGGGAACATACATTTCTCCAGGTATGAGAGCAGGAGCAGAGAGGACTGGAACTGACATGAGACGTAGGAATGATGAAAACTCTGTTCGTGTCACCAACCTTTCGGAGGACACTAGAGAGCCCGACTTGCTTGAGCTCTTCCGACCTTTTGGTGCTGTTAGCCGAGTTTATGTGGCTGTTGATCAAAAGACTAGCATGAGCAGAGGATTTGGTTTTGTAAACTTTGTGAACCGCGACGATGCACAAAGATCAATTAGCAAACTCAATGGATATGGTTATGATAATCTCATCCTTAGAGTTGAGTGGGCCACTCCAAGGGCAACTTAA | 855 | 49.36 | MVQPKLRWGELDDDDGDLDFLLPPKQIIGPDVNGLKKTIEYQFNEDGNKVKIITTSRTRKLAHARLSKHAVERRSWPKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVAGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLVPQADGLDKTVAPEATTAAPAATKGTYISPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTSMSRGFGFVNFVNRDDAQRSISKLNGYGYDNLILRVEWATPRAT | 284 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 11780415 | 11782276 | - | Hsped.02g09710.1 | Hepe02g0971 | 562472 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g0971 | 284 | Gene3D | - | 168 | 284 | IPR012677 | - | |
Hepe02g0971 | 284 | Hamap | Eukaryotic translation initiation factor 3 subunit G [EIF3G]. | 5 | 283 | IPR017334 | GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0005852(InterPro) | |
Hepe02g0971 | 284 | SMART | rrm1_1 | 204 | 277 | IPR000504 | GO:0003723(InterPro) | |
Hepe02g0971 | 284 | SUPERFAMILY | RNA-binding domain, RBD | 201 | 282 | IPR035979 | GO:0003676(InterPro) | |
Hepe02g0971 | 284 | CDD | RRM_eIF3G_like | 204 | 279 | IPR034240 | - | |
Hepe02g0971 | 284 | CDD | eIF3G | 33 | 152 | IPR024675 | - | |
Hepe02g0971 | 284 | PIRSF | Transl_init_eIF-3_RNA-bind | 1 | 284 | IPR017334 | GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0005852(InterPro) | |
Hepe02g0971 | 284 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 203 | 281 | IPR000504 | GO:0003723(InterPro) | |
Hepe02g0971 | 284 | Pfam | Eukaryotic translation initiation factor 3 subunit G | 28 | 153 | IPR024675 | - | |
Hepe02g0971 | 284 | FunFam | Eukaryotic translation initiation factor 3 subunit G | 168 | 284 | - | - | |
Hepe02g0971 | 284 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G | 39 | 279 | - | - | |
Hepe02g0971 | 284 | Pfam | RNA recognition motif | 205 | 271 | IPR000504 | GO:0003723(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g0971 | Hepe-Chr2:11780415 | Hepe07g2548 | Hepe-Chr7:69918431 | 3.59e-191 | dispersed | |
Hepe02g0971 | Hepe-Chr2:11780415 | Hepe10g0571 | Hepe-Chr10:6850760 | 4.24e-09 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g0971 | K03248 | - | csv:101207022 | 520.776 |