Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0978 ATGGCGATTGTGATTTTTCTAACAACGTTTCTAGTGATTTTTGTTTCATCACTTGCAAAGATTGCATATGATACTGTCTCATACTACTGGCTGACCCCAAGAAGAATCCGAAAGAGGATGGCGAAGCAAGGTGTTCATGGCCCCGACCCACGACCGCTCACCGGAAACATCTTCGATGTAGTGGAGCTCGTGGCGAAATCCACCGCCGGCGACATGGGCTCGATCGATCACGACATCGTCGACCGCCTGTTGCCTTATTACACCGCTTGGACAAAGCAATACGGAAAAAGATTTATTTACTGGAACGGGACGGAGCCGAGGCTGTGTTTGGCGGAGACGGAATTGGTAAAGGAACTATTGGGAAAAAACAGCAGTGTGTGTGGGAGATCATGGTTGCAAAGACAAGGAACCAAACATTTCATAGGAAAAGGATTGTTGATGGCAAATGGGGAAGATTGGTATCACCAACGTCATATCCTTGCCCCTGCGTTTATGGGGGACAAGCTCAAGAGCTATGTGGGGTTGATGGTGGAATGCACTAAGAAAATGATTCAATCAGTGGAGGCCGAGTTGGACTCGGGCCGGACCGAGTTCGAGATCGCCGATTACATGAAGCAACTCACCGCCGACATCATTTCTCGGGCCGAGTTCGATACTAGCTCCGAGAAAGGCAAACAAATTTTTCATTTGCTCACTACTCTTCAGCGTCTATGCGCCCAAGCCACCCGTCACCTCTTCCTTCCCGGTAGCTGGTTTTTCCCAAGTAAATACAACAGAGAAATAAAGACACTAAAAATGGAGGTAGAGAGGTTGTTAATGGAGATTATTCAGAGCAGGAAAAACGGTGTGGAGATTGGAAGAAGCACTTGTTATGGAAGTGATTTGTTGGGAGCGCTTTTGAATGAGATGCAAAGGAAGAGAGAAGATGGATTCAGCTTGAACTTGCAGGTGATAATGGATGAATGTAAAACTTTATTCTTTGCCGGCCATGATACCACTGCTCTTTTGCTCAGTTGGACCATCATGTTGTTGGCCACTAACCCTAATTGGCAAGAAAGGGTTCGTGCTGAAGTCAAGCAAGTTTGCAATGGTGGAACTCCCTCTCTTGAACATCTCTCTAAGCTCACTTTGCTAAACATGGTGATAAACGAATCCCTAAGGCTTTACCCACCGGCCACCGTGCTTCCGAGAATAGCGTTCGAAGACATAAAGTTGGGAGACTTGGAGATCCCGAAAGGGCTATCGATATGGATTCCGGTGCTCGCGATTCATCACAGCAAAGAGTTGTGGGGAAAAGATGCAAACGAGTTCAAACCGGAAAGATTTGCCTCAAAATCATTCAATGCTGGACGTTTCATTCCATTTGCATCTGGACCAAGAAATTGCATTGGCCAAGTTTTTGCATTGATGGAAGCTAAGATCATCTTGACTATGCTCCTCTCAAAGTTTAACTTCACTATTTCAGATACTTATCGCCATGCTCCTGTTATTGTTCTCACCATACAGCCTAAGTATGGAGTTCAAGTTTGTTTGACCCCATTGAATTCTTGA 1551 45.71 MAIVIFLTTFLVIFVSSLAKIAYDTVSYYWLTPRRIRKRMAKQGVHGPDPRPLTGNIFDVVELVAKSTAGDMGSIDHDIVDRLLPYYTAWTKQYGKRFIYWNGTEPRLCLAETELVKELLGKNSSVCGRSWLQRQGTKHFIGKGLLMANGEDWYHQRHILAPAFMGDKLKSYVGLMVECTKKMIQSVEAELDSGRTEFEIADYMKQLTADIISRAEFDTSSEKGKQIFHLLTTLQRLCAQATRHLFLPGSWFFPSKYNREIKTLKMEVERLLMEIIQSRKNGVEIGRSTCYGSDLLGALLNEMQRKREDGFSLNLQVIMDECKTLFFAGHDTTALLLSWTIMLLATNPNWQERVRAEVKQVCNGGTPSLEHLSKLTLLNMVINESLRLYPPATVLPRIAFEDIKLGDLEIPKGLSIWIPVLAIHHSKELWGKDANEFKPERFASKSFNAGRFIPFASGPRNCIGQVFALMEAKIILTMLLSKFNFTISDTYRHAPVIVLTIQPKYGVQVCLTPLNS 516
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 11869814 11874278 + Hsped.02g09780.1 Hepe02g0978 562479
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0978 516 Coils Coil 261 281 - -
Hepe02g0978 516 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0978 516 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0978 516 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0978 516 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0978 516 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0978 516 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0978 516 Pfam Cytochrome P450 86 489 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0978 516 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0978 516 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0978 516 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0978 516 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0978 516 SUPERFAMILY Cytochrome P450 78 513 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0978 516 PANTHER CYTOCHROME P450 FAMILY MEMBER 11 507 IPR050665 GO:0004497(PANTHER)
Hepe02g0978 516 Gene3D Cytochrome P450 28 515 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0623 Hepe-Chr1:67908073 Hepe02g0978 Hepe-Chr2:11869814 2.68e-89 dispersed
Hepe02g0978 Hepe-Chr2:11869814 Hepe10g1812 Hepe-Chr10:54896365 1.03e-117 dispersed
Hepe02g0978 Hepe-Chr2:11869814 Hepe02g0979 Hepe-Chr2:11911523 0.0 tandem
Hepe04g0987 Hepe-Chr4:64359437 Hepe02g0978 Hepe-Chr2:11869814 4.80e-35 transposed
Hepe06g0699 Hepe-Chr6:51248804 Hepe02g0978 Hepe-Chr2:11869814 3.68e-102 transposed
Hepe07g0152 Hepe-Chr7:1395325 Hepe02g0978 Hepe-Chr2:11869814 6.05e-105 transposed
Hepe02g0978 Hepe-Chr2:11869814 Hepe02g3261 Hepe-Chr2:82220943 3.89e-284 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0978 K10717 - csv:101213604 896.345