Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe02g0979 | ATGGCGATTGTGATTTTTCTAACAACGCTTCTAGTGATTTTTGTTTCATCACTTGCAAAGATTGCATATGATTCTGTCTCATACTACTGGCTGACCCCAAGAAGAATCCGAAAGAGGATGGCGAAGCAAGGTGTTCATGGCCCCGACCCACGACCGCTGACCGGAAACATCTTCGATGTAGTGGAGCTCGTGGCGAAATCCACCGCCGGCGACATGGGCTCGATCAATCACGACATCGTCGACCGCCTGTTGCCTTATTACACCGCTTGGACAAAGCAATACGGAAAGAGGTTTATTTATTGGAACGGGACGGAGCCGAGGTTGTGTTTGTTGGAGACGGAATTGGTAAAGGAACTATTGGGAAAAAGCAGCAGTGTGTATGGGAGATCATGGTTGCAAAGACAAGGAACCAAACATTTCATAGGAAAAGGATTGTTGATGGCAAATGGGGAAGATTGGTATCACCAACGTCATATCCTTGCCCCTTCGTTTACGGGGGACAAGCTCAAGAGCTATGCGGGGTTGATAGTGGAATGCACTAAGAAAATGATTCAATCAGTGGAGACCGAGTTGGACTCGGGCCGGATCGAGTTCGAGATCGCCGATTACATGAAGCAACTCACCGCCGACATCATTTCTCGGGCCGTGTTCGATACTAGCTCCGACAAAGGCAAGCAAATTTTCCATTTGCTCACTACTCTTCAGCACCTCTCCGCCCAAGCCACCCGTCATCTCTTCCTTCCCGGTAGCCGGTTTTTCCCAAGTAAATACAACAGAGAAATAAAGACACTAGAAATGGAGGTGGAGAGGTTGTTAATGGAGATTATTCAGAGCAGGAAAAACGGTGTGGAGATTGGAAGAAGCACTTGTTATGGAAGTGATTTGTTGGGAGCGCTTTTGAATGAGATGCAAAGGAAGAGAGAAGATGGATTCAGCTTGAACTTGCAGGTGATAATGGATGAATGCAAAACTTTATTCTTTGCCGGCCATGATACCACTGCTCTTTTGCTCAGTTGGACCATCATGTTGTTGGCCACTAACCCTAATTGGCAAGAAAGGGTTCGTGCTGAAGTCAAGCAAGTTTGCAATGGTGGAACTCCCTCTCTTCAACATCTCTCTAACCTCACTTTGCTAAACATGGTGATAAACGAATCCCTAAGGCTTTACCCACCGGTCAACGTGCTTCCGAGAATAGCGTTCGAAGACATAAAGTTGGGAGACTTGGAGATCCCGAAAGGGCTATCGATATGGATTCCGATGCTCGCGATTCATCACAGCAAAGAGTTGTGGGGAAAAGATGCAAACGAGTTCAAACCGGAAAGATTTGCCTCAAAATCATTCCATGCTGGACGTTTCATTCCATTTCTATCTGGACCAAGAAATTGCATTGGCCAAGTTTTTGCATTGATGGAAGCTAAGATCATCTTGGCTATGCTCCTCTCAAAGTTTAGCTTCACTATTTCAGATACTTATCGCCATGCTCCTGTTATTGTTATCACCATACAGCCTAAGTATGGAGTTCAAGTTTGTTTGACCCCATTGAATTCTTGA | 1551 | 45.71 | MAIVIFLTTLLVIFVSSLAKIAYDSVSYYWLTPRRIRKRMAKQGVHGPDPRPLTGNIFDVVELVAKSTAGDMGSINHDIVDRLLPYYTAWTKQYGKRFIYWNGTEPRLCLLETELVKELLGKSSSVYGRSWLQRQGTKHFIGKGLLMANGEDWYHQRHILAPSFTGDKLKSYAGLIVECTKKMIQSVETELDSGRIEFEIADYMKQLTADIISRAVFDTSSDKGKQIFHLLTTLQHLSAQATRHLFLPGSRFFPSKYNREIKTLEMEVERLLMEIIQSRKNGVEIGRSTCYGSDLLGALLNEMQRKREDGFSLNLQVIMDECKTLFFAGHDTTALLLSWTIMLLATNPNWQERVRAEVKQVCNGGTPSLQHLSNLTLLNMVINESLRLYPPVNVLPRIAFEDIKLGDLEIPKGLSIWIPMLAIHHSKELWGKDANEFKPERFASKSFHAGRFIPFLSGPRNCIGQVFALMEAKIILAMLLSKFSFTISDTYRHAPVIVITIQPKYGVQVCLTPLNS | 516 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 11911523 | 11916074 | + | Hsped.02g09790.1 | Hepe02g0979 | 562480 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe02g0979 | 516 | Coils | Coil | 261 | 281 | - | - | |
| Hepe02g0979 | 516 | Gene3D | Cytochrome P450 | 28 | 515 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe02g0979 | 516 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 6 | 507 | IPR050665 | GO:0004497(PANTHER) | |
| Hepe02g0979 | 516 | PRINTS | P450 superfamily signature | 453 | 462 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe02g0979 | 516 | PRINTS | P450 superfamily signature | 328 | 345 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe02g0979 | 516 | PRINTS | P450 superfamily signature | 380 | 391 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe02g0979 | 516 | PRINTS | P450 superfamily signature | 462 | 473 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe02g0979 | 516 | PRINTS | E-class P450 group I signature | 452 | 462 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe02g0979 | 516 | PRINTS | E-class P450 group I signature | 420 | 444 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe02g0979 | 516 | PRINTS | E-class P450 group I signature | 337 | 363 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe02g0979 | 516 | PRINTS | E-class P450 group I signature | 91 | 110 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe02g0979 | 516 | PRINTS | E-class P450 group I signature | 317 | 334 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe02g0979 | 516 | PRINTS | E-class P450 group I signature | 462 | 485 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe02g0979 | 516 | SUPERFAMILY | Cytochrome P450 | 78 | 513 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe02g0979 | 516 | Pfam | Cytochrome P450 | 86 | 489 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe02g0979 | Hepe-Chr2:11911523 | Hepe02g3261 | Hepe-Chr2:82220943 | 1.66e-278 | dispersed | |
| Hepe02g0978 | Hepe-Chr2:11869814 | Hepe02g0979 | Hepe-Chr2:11911523 | 0.0 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe02g0979 | K10717 | - | csv:101213604 | 875.93 |