Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0979 ATGGCGATTGTGATTTTTCTAACAACGCTTCTAGTGATTTTTGTTTCATCACTTGCAAAGATTGCATATGATTCTGTCTCATACTACTGGCTGACCCCAAGAAGAATCCGAAAGAGGATGGCGAAGCAAGGTGTTCATGGCCCCGACCCACGACCGCTGACCGGAAACATCTTCGATGTAGTGGAGCTCGTGGCGAAATCCACCGCCGGCGACATGGGCTCGATCAATCACGACATCGTCGACCGCCTGTTGCCTTATTACACCGCTTGGACAAAGCAATACGGAAAGAGGTTTATTTATTGGAACGGGACGGAGCCGAGGTTGTGTTTGTTGGAGACGGAATTGGTAAAGGAACTATTGGGAAAAAGCAGCAGTGTGTATGGGAGATCATGGTTGCAAAGACAAGGAACCAAACATTTCATAGGAAAAGGATTGTTGATGGCAAATGGGGAAGATTGGTATCACCAACGTCATATCCTTGCCCCTTCGTTTACGGGGGACAAGCTCAAGAGCTATGCGGGGTTGATAGTGGAATGCACTAAGAAAATGATTCAATCAGTGGAGACCGAGTTGGACTCGGGCCGGATCGAGTTCGAGATCGCCGATTACATGAAGCAACTCACCGCCGACATCATTTCTCGGGCCGTGTTCGATACTAGCTCCGACAAAGGCAAGCAAATTTTCCATTTGCTCACTACTCTTCAGCACCTCTCCGCCCAAGCCACCCGTCATCTCTTCCTTCCCGGTAGCCGGTTTTTCCCAAGTAAATACAACAGAGAAATAAAGACACTAGAAATGGAGGTGGAGAGGTTGTTAATGGAGATTATTCAGAGCAGGAAAAACGGTGTGGAGATTGGAAGAAGCACTTGTTATGGAAGTGATTTGTTGGGAGCGCTTTTGAATGAGATGCAAAGGAAGAGAGAAGATGGATTCAGCTTGAACTTGCAGGTGATAATGGATGAATGCAAAACTTTATTCTTTGCCGGCCATGATACCACTGCTCTTTTGCTCAGTTGGACCATCATGTTGTTGGCCACTAACCCTAATTGGCAAGAAAGGGTTCGTGCTGAAGTCAAGCAAGTTTGCAATGGTGGAACTCCCTCTCTTCAACATCTCTCTAACCTCACTTTGCTAAACATGGTGATAAACGAATCCCTAAGGCTTTACCCACCGGTCAACGTGCTTCCGAGAATAGCGTTCGAAGACATAAAGTTGGGAGACTTGGAGATCCCGAAAGGGCTATCGATATGGATTCCGATGCTCGCGATTCATCACAGCAAAGAGTTGTGGGGAAAAGATGCAAACGAGTTCAAACCGGAAAGATTTGCCTCAAAATCATTCCATGCTGGACGTTTCATTCCATTTCTATCTGGACCAAGAAATTGCATTGGCCAAGTTTTTGCATTGATGGAAGCTAAGATCATCTTGGCTATGCTCCTCTCAAAGTTTAGCTTCACTATTTCAGATACTTATCGCCATGCTCCTGTTATTGTTATCACCATACAGCCTAAGTATGGAGTTCAAGTTTGTTTGACCCCATTGAATTCTTGA 1551 45.71 MAIVIFLTTLLVIFVSSLAKIAYDSVSYYWLTPRRIRKRMAKQGVHGPDPRPLTGNIFDVVELVAKSTAGDMGSINHDIVDRLLPYYTAWTKQYGKRFIYWNGTEPRLCLLETELVKELLGKSSSVYGRSWLQRQGTKHFIGKGLLMANGEDWYHQRHILAPSFTGDKLKSYAGLIVECTKKMIQSVETELDSGRIEFEIADYMKQLTADIISRAVFDTSSDKGKQIFHLLTTLQHLSAQATRHLFLPGSRFFPSKYNREIKTLEMEVERLLMEIIQSRKNGVEIGRSTCYGSDLLGALLNEMQRKREDGFSLNLQVIMDECKTLFFAGHDTTALLLSWTIMLLATNPNWQERVRAEVKQVCNGGTPSLQHLSNLTLLNMVINESLRLYPPVNVLPRIAFEDIKLGDLEIPKGLSIWIPMLAIHHSKELWGKDANEFKPERFASKSFHAGRFIPFLSGPRNCIGQVFALMEAKIILAMLLSKFSFTISDTYRHAPVIVITIQPKYGVQVCLTPLNS 516
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 11911523 11916074 + Hsped.02g09790.1 Hepe02g0979 562480
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0979 516 Coils Coil 261 281 - -
Hepe02g0979 516 Gene3D Cytochrome P450 28 515 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0979 516 PANTHER CYTOCHROME P450 FAMILY MEMBER 6 507 IPR050665 GO:0004497(PANTHER)
Hepe02g0979 516 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0979 516 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0979 516 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0979 516 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0979 516 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0979 516 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0979 516 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0979 516 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0979 516 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0979 516 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0979 516 SUPERFAMILY Cytochrome P450 78 513 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0979 516 Pfam Cytochrome P450 86 489 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0979 Hepe-Chr2:11911523 Hepe02g3261 Hepe-Chr2:82220943 1.66e-278 dispersed
Hepe02g0978 Hepe-Chr2:11869814 Hepe02g0979 Hepe-Chr2:11911523 0.0 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0979 K10717 - csv:101213604 875.93