Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0994 ATGGCGTCGCTAATGTCGGCCTCCAGAATTCAATCGGCCACTTCTGTTCTTTCCTCCTCCATCAAGCACCTGCGTTTCAATTCCTCGCTTTCCCCTTTTCACCATTCCTCCTTCTGCTTGATGCGCTCTGCAGCATCTAGACGAGCTCTCTCTGTTTCCATGTCCGCTACCCCTCTTGAAATCTGCGTCAAAGCTTCCATCACTGTCCCCAACAAGCTCGGCGACTGCCCTTTTTGCCAAAGGGTGTTGCTGACATTGGAGGAAAAACATCTACCTTATGACCTTAAGTTGGTAGACTTCGCCAACAAGCCTGAATGGTTCTTAAAAATAAATTCAGAGGGCAAAGTTCCTGTGATTAAATTTGATGAGCAGTGGGTTGCAGATTCAGATGTTATAACACAAACACTGGAAGAGAAGTACCCAAATCCACCTTTAGCGACCCCTCCTGATAAGTCTTCAGTAGGATCGAAGATCTTTTCCACATTCATTGCTTTCCTTAAGAGCAAGGATCCTAATGATGGAACAGAACAAGCATTGCTCAGTGAGCTGAGTTCTTTCAATGATCACATCAAAGAGAATGGCCCTTTTATCAATGGGGAACAGATTTCGGCTGCAGACCTGTCACTGGGTCCAAAGTTGTTCCATCTAGAAATTGTATTGGGACACTACAAGAACTGGTCTGTTCCAGACAGCCTGCCCTATGCTAAATCTTACATGCAGAGTATATTTTCAAGAGAGTCATTTGCAAAAACTCGTGCACTGTCCGAGGATGTTATTGCTGGTTGGCGTTCGAAGGTCTTGGGTTAA 807 45.23 MASLMSASRIQSATSVLSSSIKHLRFNSSLSPFHHSSFCLMRSAASRRALSVSMSATPLEICVKASITVPNKLGDCPFCQRVLLTLEEKHLPYDLKLVDFANKPEWFLKINSEGKVPVIKFDEQWVADSDVITQTLEEKYPNPPLATPPDKSSVGSKIFSTFIAFLKSKDPNDGTEQALLSELSSFNDHIKENGPFINGEQISAADLSLGPKLFHLEIVLGHYKNWSVPDSLPYAKSYMQSIFSRESFAKTRALSEDVIAGWRSKVLG 268
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 12134834 12139714 + Hsped.02g09940.1 Hepe02g0994 562495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0994 268 SFLD Main (cytGST) 75 242 - -
Hepe02g0994 268 Pfam Glutathione S-transferase, C-terminal domain 177 240 - -
Hepe02g0994 268 Gene3D Glutaredoxin 57 145 - -
Hepe02g0994 268 FunFam Glutathione S-transferase DHAR3 chloroplastic 57 145 - -
Hepe02g0994 268 CDD GST_N_family 76 137 - -
Hepe02g0994 268 SFLD Glutathione Transferase (cytosolic) 75 242 IPR040079 -
Hepe02g0994 268 CDD GST_C_DHAR 145 265 - -
Hepe02g0994 268 Pfam Glutathione S-transferase, N-terminal domain 76 138 IPR004045 -
Hepe02g0994 268 FunFam Glutathione S-transferase DHAR3, chloroplastic 146 268 - -
Hepe02g0994 268 SUPERFAMILY Thioredoxin-like 74 143 IPR036249 -
Hepe02g0994 268 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 66 144 IPR004045 -
Hepe02g0994 268 Gene3D - 146 267 - -
Hepe02g0994 268 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 59 265 IPR044627 GO:0010731(PANTHER)|GO:0033355(InterPro)|GO:0045174(PANTHER)|GO:0045174(InterPro)|GO:0098869(InterPro)
Hepe02g0994 268 SUPERFAMILY GST C-terminal domain-like 139 266 IPR036282 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0842 Hepe-Chr1:72422426 Hepe02g0994 Hepe-Chr2:12134834 2.69e-35 dispersed
Hepe01g0844 Hepe-Chr1:72439030 Hepe02g0994 Hepe-Chr2:12134834 9.16e-40 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0994 K21888 - csv:101203335 458.759