Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g1016 | ATGGAGAATTTGATGGGTCTGCTGAGAATCCATGTGTTCAGAGGTGTTAATCTTGCTGTAAGAGATGTTGTTAGCAGTGATCCTTATGTTATTGTCAAGATGGGCAAACAGAAGTTGAAGACTCGAGTAGTGAAGCAAAATATCAACCCGGAGTGGAATGAAGATCTAACTCTATCGGTCCAAGATCCAAATATTCCCGTCAACGTGCTGGTATACGACAAGGACTTGTTCTCGCTAGACGACAGGATGGGCGATGCGGAGTTCGACGTTCGTCCGTTCATGGAAGCCGTAAAGATGAGACTAAACAACCTCCCAAGTGGAACCATCATAAGAAAGATTCAACCAAGTAGGGATAATTGCCTGTCTGAAGAAAGTTGCATTGTTTGGGCAAATGGACAAGTTATTCAAAAGATGTTTCTAAGGCTAAGAAATGTGGAGTGTGGTGAAGTTGAGTTGCAAATGCAATGGATTGATATTCCTGGTTCAAGGGGATTGTAG | 498 | 42.77 | MENLMGLLRIHVFRGVNLAVRDVVSSDPYVIVKMGKQKLKTRVVKQNINPEWNEDLTLSVQDPNIPVNVLVYDKDLFSLDDRMGDAEFDVRPFMEAVKMRLNNLPSGTIIRKIQPSRDNCLSEESCIVWANGQVIQKMFLRLRNVECGEVELQMQWIDIPGSRGL | 165 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 12515958 | 12517218 | + | Hsped.02g10160.1 | Hepe02g1016 | 562517 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g1016 | 165 | ProSiteProfiles | C2 domain profile. | 1 | 103 | IPR000008 | - | |
Hepe02g1016 | 165 | Gene3D | C2 domain | 4 | 160 | IPR035892 | - | |
Hepe02g1016 | 165 | SMART | C2_3c | 7 | 102 | IPR000008 | - | |
Hepe02g1016 | 165 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 2 | 109 | IPR035892 | - | |
Hepe02g1016 | 165 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 1 | 163 | IPR044562 | - | |
Hepe02g1016 | 165 | Pfam | C2 domain | 6 | 93 | IPR000008 | - | |
Hepe02g1016 | 165 | CDD | C2_ArfGAP | 6 | 148 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g1016 | Hepe-Chr2:12515958 | Hepe09g0393 | Hepe-Chr9:3530798 | 1.24e-83 | dispersed | |
Hepe02g1016 | Hepe-Chr2:12515958 | Hepe07g2353 | Hepe-Chr7:67880684 | 2.47e-84 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g1016 | - | - | - | 0.0 |