Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g1065 ATGCCCTTAGAAGGGATTTTTATTGAACCTTCTTCAACACCACTGCCTGATCTCTCTCTTCAAATCAGCCCTCCAAATGCTTCAACTTCTTCTTCTTCATCATCATCTTCTTCTTATTCTTCAATTAGAACCCTCAACCATGGATTTTCAGAAACAAGTTTTGATCTTTTGATCCAAAGAAACTCCCAATTCCAAATTAATTCCAATACTAACCCTCAAGCTCACACCGAGCTCTCTCTCGGCGGAGCGCCACCGCCCGGCCCGCATCTTCGCGGGGTTTCGGTGTTCAACGTAGCGGACGGTGGGTTGCGGCCGATTAAAGGGATTCCGGTGTATCACAACCGTCCATTTCCATTTTTGGCTGTGGATCATCAAAAAGATCACCATTTTCATCATCGTCATCAACATCAACATCACCAATTTCCATCGGCGGCTTGCTTCTACCCGAATTACTCGAACTCGAACTCGAATGGAGTTCTTCAAATGGCCGGTTATCATCATCATCATCATCATCATCGAGTTGGAGGAAATAATAATTCTTCTGCGAGGTTCAACAATAATGGGGTTGTTTCTGTAGAAGCAATTAAATCTTTGAATCATAATAATATTAGTAATAGTAATGCAGCTTCTTCTTCTTCTGATGTTTGTTCTCATGGGATGATGATGAGATCCAGATTTTTGCAGAAGCTTCCTGCAAAACGAAGCATGAGGGCTCCTAGAATGAGATGGACTAGCTCCTTACATGCTCGCTTCGTTCACGCCGTCGAACATCTCGGCGGCCACGAAAGAGCTACACCAAAATCAGTTCTTGAGCTGATGGATGTTAAGGATCTAACTCTGGCTCATGTCAAAAGTCATTTACAGATGTATCGGACTGTTAAGACCACTGACAAGCCTGCAGCTTCCTCAGGTCAATCCGACGGTTCCGGGGAGGATGATGTATCTCCTACAATAGGCACGGCCATAGAGGATAATAGCCCGAGGGAATTTTCCGATCAAAGAGCTCCGCCGGACCGGTCCGGCCAGCCGCCACCAGATTTGGAATTTGGCTCCTCCACTCTTTGGTCTAATTCTTCAAGAGATGTGTGGCCACAAACAAACTCTAATGAAATGAATGTCATTAGACCAACTTCATCTACCCAAATGCACCAAAAATCCATGCACCAAATTGAGGAATGTGATTCAGGTGCAATAATGAAGAGATACAATGCTTCAGAATGCAAGAAACCAAGCTTGGAGTTCAGGTTAGGCAGAGCAGAATGGGATGTCAAAGAAGACTAA 1281 44.42 MPLEGIFIEPSSTPLPDLSLQISPPNASTSSSSSSSSSYSSIRTLNHGFSETSFDLLIQRNSQFQINSNTNPQAHTELSLGGAPPPGPHLRGVSVFNVADGGLRPIKGIPVYHNRPFPFLAVDHQKDHHFHHRHQHQHHQFPSAACFYPNYSNSNSNGVLQMAGYHHHHHHHRVGGNNNSSARFNNNGVVSVEAIKSLNHNNISNSNAASSSSDVCSHGMMMRSRFLQKLPAKRSMRAPRMRWTSSLHARFVHAVEHLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGQSDGSGEDDVSPTIGTAIEDNSPREFSDQRAPPDRSGQPPPDLEFGSSTLWSNSSRDVWPQTNSNEMNVIRPTSSTQMHQKSMHQIEECDSGAIMKRYNASECKKPSLEFRLGRAEWDVKED 426
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 13232856 13240546 + Hsped.02g10650.1 Hepe02g1065 562566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g1065 426 MobiDBLite consensus disorder prediction 1 42 - -
Hepe02g1065 426 Pfam Myb-like DNA-binding domain 240 291 IPR001005 -
Hepe02g1065 426 SUPERFAMILY Homeodomain-like 236 292 IPR009057 -
Hepe02g1065 426 MobiDBLite consensus disorder prediction 346 370 - -
Hepe02g1065 426 Gene3D - 238 295 - -
Hepe02g1065 426 MobiDBLite consensus disorder prediction 67 86 - -
Hepe02g1065 426 MobiDBLite consensus disorder prediction 14 42 - -
Hepe02g1065 426 MobiDBLite consensus disorder prediction 296 326 - -
Hepe02g1065 426 MobiDBLite consensus disorder prediction 296 370 - -
Hepe02g1065 426 NCBIfam myb-like DNA-binding domain, SHAQKYF class 239 292 IPR006447 GO:0003677(InterPro)
Hepe02g1065 426 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 10 424 IPR044847 GO:0000976(PANTHER)|GO:0000976(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006355(PANTHER)|GO:0010158(InterPro)
Hepe02g1065 426 FunFam Myb family transcription factor 237 295 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1065 Hepe-Chr2:13232856 Hepe02g2403 Hepe-Chr2:69626014 3.06e-41 dispersed
Hepe02g1065 Hepe-Chr2:13232856 Hepe06g1799 Hepe-Chr6:69069954 1.09e-48 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55013 None None None None Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g1065 - - - 0.0