Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g1085 ATGACAGAAGGTAGGATTGTTTGGGTATCAGTAGGCATATTGGTGTGTTTGTTCATGGTTCAAAGATTTGGAACTGATAAAGTTGGGTACACTTTTGCCCCAATTATCTTCATTTGGTTTACTTTCAACGCTGGAATCGGTGTCTACAACTTCATTAAATACGACCCAACTGTGATTAAGGCCTTAAATCCAACCTACATTGTTCATTATTTCCAAAGGAACAAAAAAGATGCTTGGATTTCTCTTGGTGGCATTGTTCTTGCCATTACAGGGACCGAAGCCTTGTTCGCCGATGTCGGGCATTTCAGCGTCCGATCGATCCAGCTGAGCATGTCGGCAGTGACCTACCCAGCTCTAATCTGTGCTTATGTAGGCCAAGCCTCCTTTCTTCGCAAGCATAATGATCTAGTTTCAGACATATTCTACAAGTCAATTCCTGGAGGTTTGTATTGGCCAATGTTTGTGGTGGCAGTTTCAGCATCAATCATAGCAAGCCAAGCAATGATCTCAGGAACATTCTCTATAATTCAACAGTCACTTTCACTTGGATGCTTCCCTAGAGTTAAAGTGGTTCATACATCTGCTAAGTATGAAGGCCAAGTTTATGTTCCTGAGATCAATTACCTTCTCATGTTGGCTTGTGTTGGTGTTACTTTGGGCTTCAAGAACACTACCAAGATTGGCAATGCATATGGAATAGCAGTGGTTTTTGTGATGACACTCACATCCTCCTTTCTAGTACTGATAATGGTGATGATATGGAAAACCCACATCATTTTCATAATCACTTACATCCTCATCATTGGCAGTGTGGAATTTCTGTATCTGAGTTCAGTCCTTTACAAGTTTGACCAAGGAGGCTATCTCCCTCTGGCTTTTGCAGCTGTTTTGATGACTATAATGTATGTGTGGAATAGTGTCTTTAGAAAGAAGTACTTTTATGAGCTCAACCACAAAATCTCTCCACAAAAGCTCAATGAGATGGTTAATACCACCAGATTTAGAAGAATCCCTGGCATGGCATTGTTCTACTCTGAGCTTGTTCAAGGCATCCCTCCCATCTTCAAGCATTACGTCGAGCACGTGCCCGCGTTGCACTCCGTGCTCGTCTTCGTCACCATTAAATCACTTCCAGTGAGCAAGGTTCCGGCTGATGAACGTTTCCTCTTCCGGAAAGTAGAGGCGAAGGAGATCGACGTGTTTCGTTGTGTTGTTCGATATGGGTACACAGACGTGCACACCGAACAAGAATCGTTCGAGAAGATATTACTCGAGAGATTGGAAGAGTTCGAAAGAGACCAACAAGCGATATTGTCTAACAACGAAAACGGAGTCGGTGGGAGAGTTGAAGATGAGGGTGAGGATGAGAAAGGATTTGGAGGAGTTGCAGAAGCATGGAAGGATGGCGTTGTTCATTTGGTTGGGGAGACTGAGGTGGTTGCTCAAAAAGAGGCTGGCTTTGGAAAGAGGATTATGATAAACTATGCATATAGCTTCTTGAAGAGGAATTTGAGGCAATCTGATCAAATGTTTGATATTCCTCATAAGCATATGCTCAAAGTAGGAATGACTTATGAACTTTAG 1584 42.61 MTEGRIVWVSVGILVCLFMVQRFGTDKVGYTFAPIIFIWFTFNAGIGVYNFIKYDPTVIKALNPTYIVHYFQRNKKDAWISLGGIVLAITGTEALFADVGHFSVRSIQLSMSAVTYPALICAYVGQASFLRKHNDLVSDIFYKSIPGGLYWPMFVVAVSASIIASQAMISGTFSIIQQSLSLGCFPRVKVVHTSAKYEGQVYVPEINYLLMLACVGVTLGFKNTTKIGNAYGIAVVFVMTLTSSFLVLIMVMIWKTHIIFIITYILIIGSVEFLYLSSVLYKFDQGGYLPLAFAAVLMTIMYVWNSVFRKKYFYELNHKISPQKLNEMVNTTRFRRIPGMALFYSELVQGIPPIFKHYVEHVPALHSVLVFVTIKSLPVSKVPADERFLFRKVEAKEIDVFRCVVRYGYTDVHTEQESFEKILLERLEEFERDQQAILSNNENGVGGRVEDEGEDEKGFGGVAEAWKDGVVHLVGETEVVAQKEAGFGKRIMINYAYSFLKRNLRQSDQMFDIPHKHMLKVGMTYEL 527
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 13473294 13479692 - Hsped.02g10850.1 Hepe02g1085 562586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g1085 527 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 3 526 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Hepe02g1085 527 Pfam K+ potassium transporter integral membrane domain 5 324 IPR053951 -
Hepe02g1085 527 NCBIfam potassium uptake protein 2 526 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Hepe02g1085 527 Pfam K+ potassium transporter C-terminal domain 338 527 IPR053952 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1085 Hepe-Chr2:13473294 Hepe05g1040 Hepe-Chr5:49397487 8.41e-182 dispersed
Hepe02g1085 Hepe-Chr2:13473294 Hepe03g1917 Hepe-Chr3:76216368 2.12e-258 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g1085 K03549 - csv:101215797 885.174