Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g1172 ATGGAGGAAAGTTTTGTTCCTTTTCGAGGAATCAAGAATGACCTGAAAGGGAGATTAGTGTGTTACAAACAAGATTGGATTGGTGGTTTGAGAGCTGGATTTAGGATTTTGGCTCCCACCACTTACATATTCTTTGCCTCTGCAATTCCTGTCATTTCATTTGGTGAACAGTTGGAGAGAAGTACTGATGGGGTGCTGACTGCAGTTCAAACTTTAGCCTCCACAGCTCTTTGTGGGATCATTCACTCCATTATTGGAGGTCAACCTTTGCTTATCTTGGGAGTTGCTGAGCCTACTGTTATTATGTACACATTCATGTTTAATTTCGCAAAGGAACGACCAGAGTTGGGCCGGAATCTGTTTCTAGCTTGGAGTGGATGGGTGTGTGTTTGGACTGCAGCCTTGCTGTTCTTAATGGCTATATTAGGAGCATGCTCCATCATCAATAGGTTCACACGTCTGGCCGGTGAATTGTTCGGTTTGCTTATCGCGATGCTTTTCATGCAGCAAGCAATCAAAGGACTTGTGGATGAATTTCTCATCCCGGAACGGGAAAATCCAAAATTGATTGAGTTTATACCTTCTTGGAGGTTTGCCAATGGGATGTTTGCTCTGGTACTGTCATTTGGCCTTCTACTCACTGCTTTAAGAAGTCGAAAAGCACGGTCGTGGCGATATGGATCTGGTTGGCTTAGAAGCTTGATAGCAGACTATGGAGTGCCGCTCATGGTTCTTGTTTGGACAGGTGTATCCTATATACCTTCAAAAAAGGTCCCACAAGGTATCCCGAGGCGACTCTTCAGCCCGAATCCATGGTCTCCCGGTGCGTATGACAATTGGACTGTTATCAAGGACATGCTTGACGTTCCAGTTTTTTATATCTGTGGAGCTTTCATTCCGGCTACGATGATTGCGGTGCTTTACTATTTCGACCATAGTGTTGCATCTCAACTTTCTCAGCAGAAAGAGTTCAATTTGAGGAAGCCATCTTCTTACCATTATGATTTACTTCTATTGGGATTCTTGACCTTAATATGTGGACTTCTTGGAATCCCTCCATCCAATGGAGTCATCCCACAATCTCCAATGCATACAAAGAGCTTGGCTACTCTCAAACACCAGTTACTGCGGAATAAACTTGTAGAAACGGCACGGAGTAGTATGAGAAAGAATGCTAGCTTGGGACAGTTGTATGGAAGTATGCAAGAAGCATATCGACAAATGCAGACCCCCTTAATCTACCAGCAGCCCGCAGTTGGTGGACTGAATGAGCTAAAAGAAACAACCATTCAAGCAGCTTCTAGTATGGGCAGTTTCGATGCTCCGGTCGATGAGACAATATTCGACATCGAAAAGGAAATTGATGATCTATTGCCCGTTGAGGTGAAAGAACAGCGCGTCAGTAATTTGCTTCAAGCGGCAATGGTGGGAGGATGCGTTGCAGCCATGCCGGTCCTGAAAAAGATCCCGACCTCGGTTCTATGGGGTTACTTTGCCTTTATGGCCATCGAAAGCTTGCCTGGTAACCAGTTTTGGGAAAGAATCTTGTTGCTCTTCACTGCACCAAGCAGAAGATACAAAGTTCTTGAGGATTACCACGCAACTTTCGTCGAAACCGTGCCATTCAAGTCGATTGCACTTTTTACCATTTTCCAAACTGTATATTTGTTCATATGTTTTGGACTAACATGGATTCCGATCGCCGGAGTTATGTTTCCTCTGATGATCATGCTCCTCATCCCTGTAAGACAATACCTTCTTCCCAAGTTTTTCAAAGGTGCACATCTCCAAGACCTTGATGCAGCTGAATATGAAGAAGCACCGGCTTTACCGTTCAATCTTGCGACGGAAGCCGAGCTCGGTGCTGGTGCATCATTTGGTGGGGATGGAGAGATTTTTGATGAGGTTATCACTCGAAGCCGTGGTGAGTTTAGGCATATTAGCAGTCCTAAAATCACAAGCTCCACGGCAACACCTACATCTGACCAAAAAGGTTTAGACAGTCCTCATCGCTCTTTCAGCCCTCGGTTGAGTGAGCTAAGAGGAGAGAGAAGTCCTCGAGCGGGTGGACAAGGGACACCAGGTCAGAGAAGTGCAGAAGCTAAACCATCCAGTCTGGGAAAGAGCCCTCTTAAGTCTTAA 2142 45.24 MEESFVPFRGIKNDLKGRLVCYKQDWIGGLRAGFRILAPTTYIFFASAIPVISFGEQLERSTDGVLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKERPELGRNLFLAWSGWVCVWTAALLFLMAILGACSIINRFTRLAGELFGLLIAMLFMQQAIKGLVDEFLIPERENPKLIEFIPSWRFANGMFALVLSFGLLLTALRSRKARSWRYGSGWLRSLIADYGVPLMVLVWTGVSYIPSKKVPQGIPRRLFSPNPWSPGAYDNWTVIKDMLDVPVFYICGAFIPATMIAVLYYFDHSVASQLSQQKEFNLRKPSSYHYDLLLLGFLTLICGLLGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVETARSSMRKNASLGQLYGSMQEAYRQMQTPLIYQQPAVGGLNELKETTIQAASSMGSFDAPVDETIFDIEKEIDDLLPVEVKEQRVSNLLQAAMVGGCVAAMPVLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEDYHATFVETVPFKSIALFTIFQTVYLFICFGLTWIPIAGVMFPLMIMLLIPVRQYLLPKFFKGAHLQDLDAAEYEEAPALPFNLATEAELGAGASFGGDGEIFDEVITRSRGEFRHISSPKITSSTATPTSDQKGLDSPHRSFSPRLSELRGERSPRAGGQGTPGQRSAEAKPSSLGKSPLKS 713
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 14587240 14591657 + Hsped.02g11720.1 Hepe02g1172 562673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g1172 713 Pfam HCO3- transporter integral membrane domain 201 372 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Hepe02g1172 713 Pfam HCO3- transporter integral membrane domain 460 602 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Hepe02g1172 713 Pfam HCO3- transporter integral membrane domain 7 178 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Hepe02g1172 713 PANTHER ANION EXCHANGE PROTEIN 4 639 IPR003020 GO:0005452(InterPro)|GO:0005886(PANTHER)|GO:0006820(InterPro)|GO:0016020(InterPro)|GO:0022857(PANTHER)|GO:0046715(PANTHER)|GO:0050801(PANTHER)|GO:0055085(PANTHER)
Hepe02g1172 713 MobiDBLite consensus disorder prediction 648 668 - -
Hepe02g1172 713 MobiDBLite consensus disorder prediction 648 713 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1172 Hepe-Chr2:14587240 Hepe07g2224 Hepe-Chr7:66604822 0.0 dispersed
Hepe02g1172 Hepe-Chr2:14587240 Hepe02g1390 Hepe-Chr2:17587505 3.67e-273 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g1172 K24194 - csv:101205388 1338.17