Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g1178 ATGGCAGCCATGGCTCTTTCATCTACCTTCACAGGAAAAGCTGTTCCTTTGAATGCACCAACCGAGCTCTCATCCTCGGTTCGCAGCAATGGTAGAGTCTCAATGAGGAAATCTGGAAAGCCAGCAGCTTCCTCAGGCAGCCCATGGTATGGTCCCGACCGTGTCAAGTACCTCGGACCATTCTCTGGTGAGGCTCCATCTTACCTCAAAGGAGAATTCCCTGGTGATTATGGTTGGGACACTGCCGGTCTATCAGCCGACCCCGAGACCTTTGCCAAGAACCGAGAGCTCGAAGTGATTCATAGTAGATGGGCCATGCTTGGAGCTCTAGGATGTGTGTTCCCAGAGCTTCTTTCCAGAAATGGTGTCAAGTTCGGTGAAGCAGTTTGGTTCAAGGCTGGTTCACAAATCTTCAGTGAGGGTGGCCTAGACTATCTTGGAAACCCAAGTCTTGTTCATGCACAGAGCATTTTGGCCATTTGGGCATCTCAAGTAGTGCTAATGGGTGCAGTTGAAGGTTACCGTATTGCCGGAGGACCACTCGGAGAAATTACCGATCCCATCTACCCAGGCGGTAGCTTTGATCCCCTCGGGCTGGCTGATGATCCAGAGGCATTTGCAGAGCTTAAGGTGAAAGAACTTAAGAATGGCCGTCTTGCAATGTTTTCCATGTTCGGGTTTTTCGTGCAGGCCATTGTAACAGGAAAAGGTCCTTTGGAGAACCTCGCAGATCATCTTGCGGATCCTGTCAACAACAATGCATGGTCTTATGCTACCAACTTTGTACCTGGGAAGTGA 798 50.0 MAAMALSSTFTGKAVPLNAPTELSSSVRSNGRVSMRKSGKPAASSGSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 14683397 14684425 - Hsped.02g11780.1 Hepe02g1178 562679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g1178 265 MobiDBLite consensus disorder prediction 21 47 - -
Hepe02g1178 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 3 265 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0009941(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro)
Hepe02g1178 265 Pfam Chlorophyll A-B binding protein 65 232 IPR022796 -
Hepe02g1178 265 FunFam Chlorophyll a-b binding protein, chloroplastic 56 258 - -
Hepe02g1178 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
Hepe02g1178 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1178 Hepe-Chr2:14683397 Hepe03g0532 Hepe-Chr3:9768512 1.01e-168 dispersed
Hepe02g1178 Hepe-Chr2:14683397 Hepe09g0112 Hepe-Chr9:895168 4.47e-29 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g1178 K08912 - csv:101203342 530.02