Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g1233 ATGTGCGGTGGTCCAGAAAAATCCAATTCTGCATCTACTACTACATCATCATCAAGCTCACCTAACCCCAAAGACATGAATCATTTAACTGTTGATTGTGAGGATTCTTTTTATAGTTTACTGGAGCTTGCTTCTGACAACGATGCAGAAGGCTTCAAGAGTTTGATGGAGTCTGATCTGTTTTCACTTAACAAGTCTGGACTCTGGTATGTTCGTCAAAAAGGTTCAAAACAAGTTGTTAATGAGCATAGAACACCCCTGATGGTTGCTGCCACATATGGTTGTGTTGATGTTCTGAAGCTTATACTATCATATCCTGAGGTCGATGTTAATCTCTCGTCTGGCACAGACAAGAGCACTGCTCTCCACTGTGCTACTTCCAGTGGATCTGTGAATGCGGCTGATATTGTTGATTTGCTTTTATCTGCTGGTGCTGACCCAAACTCCACGGATATTAATGGTGACCGCCCTGTGGATGCCATTTTTGTTCATCCAAAGTTGCAGAAGCAGAATACAAGGTTCAGGCTCGAGGAACTTCTCAATAACCATTCGAATGGATCCATGGACGTGTCCAGTTTACATTTGTCAATTAAAACGCCTGATTCAGAGTCACCACCATTTTCCTCATCTTTGGAAGATGAATTCCCATCTCCACCCAAGTCTATGTCTTCTCCCAAATTTACTGATGGGTTTGCAAACTCTACAAAGGAGAAGAAAGAATATCCAATTGATCCATCACTTCCTGACATCAAGAACAGCATATACGCAACTGATGAGTTTCGGATGTTCTCTTTCAAGGTGAGGCCTTGTTCTCGGGCATATTCCCATGATTGGACCGAGTGTCCTTTTGTCCACCCAGGGGAGAATGCTCGCAGAAGAGACCCAAGGAAGTTTCACTACAGCTGTGTTCCTTGCCCAGATTTCAGAAAGGGGGCTTGTAGGCGTGGGGATATGTGTGAATATGCACACGGAGTATTTGAGTGTTGGCTTCACCCAGCTCAATATCGAACTCGTCTTTGCAAGGATGGCACGAGTTGCAATAGGCGGGTCTGTTTCTTTGCTCACACTAATGAGGAGCTAAGGCCATTGTATGTGTCTACTGGATCTGCTGTCCCTTCCCCACGATCAATGGGGTCTGCCCCAACTGTAATGGATATGGCTACTGCATTGGGTCTTCTGCCTGGTTCCCCTTCATCAGTGTCAGCTTTATCTCCATCTCCATTTGCCCAGTCCATGTCTCCTTCGAATGGTGTTTCTCACTCTTCTATGAACTGGCAGCAACCAAATGTACCAACTCTTCATCTTCCTGGAAGTAACCTTCAGTCCAGCCGGTTGAGGTCGTCTCTGAATGCCAGGGATATGCCTCTGGAGGGTTTGAATGTCCATCATCCAGACTTTGACAACCAGCAACGGATTTTGAACGATATGAACTGTTTTTCTCAGCCTCGTCCGAGTGCCGTTTCTGTGAGCCGATCCGGTTGGACCCAAACTCTAACTCCTAACAATCTTGAAGAGCTATTTTCTTCCGAGATCTCTTCGTCTCCCCGATTCTCTGACCCAGCCGCCAATGTCTTTTCCCCTACTCGCAAATCATCGTTACTAAACCAATTTCAGCAGCAGCAGCAGAACATGTTGTCACCTATTAATACAAGCATGATGTCTCCTAAGAATGTCGATCATCCTTTGTTGCAGGCCTCTTTTGGAGTTTCATCCCCAGGAAGGATGTCGCCGAGAAGCACTGAGCCACTGTCCCCAATGGGATCAAGGTTCTCTGCCTATGTACAGCGTGAAAAACAACAGCATCTCCGTACTCTCAGCTCAAGGGAGCTCGGATCCAATGTCCCAAGCTCATTGATCGGATCTCCTGTCAATTCTATGCCGAAATGGGGGTCCCCCAATGGAAAGGTGGATTGGTCGGTTGGTAGAAATGAACTGGGTCAACTGCGAAGATCATCTTCTTTTGAGATGGGAAATAACGGGGAGGAGCCCGACTTATCATGGGTTCAATCCCTGGTGAAGGAATCCCCACCTGAGATGCTAAAGGAGAAGTTGGCAGTGTCCGGGATGGGCGCTGCTGCGGCATCCGGTGAGGGTCTAACTACTACTAAATCACAATTAGAATCCACTGATCATTCTGTGATAGGAGCTTGGCTTGAGCAGATGCAGCTTGATCAGCTTGTAGTGTAG 2187 46.59 MCGGPEKSNSASTTTSSSSSPNPKDMNHLTVDCEDSFYSLLELASDNDAEGFKSLMESDLFSLNKSGLWYVRQKGSKQVVNEHRTPLMVAATYGCVDVLKLILSYPEVDVNLSSGTDKSTALHCATSSGSVNAADIVDLLLSAGADPNSTDINGDRPVDAIFVHPKLQKQNTRFRLEELLNNHSNGSMDVSSLHLSIKTPDSESPPFSSSLEDEFPSPPKSMSSPKFTDGFANSTKEKKEYPIDPSLPDIKNSIYATDEFRMFSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTNEELRPLYVSTGSAVPSPRSMGSAPTVMDMATALGLLPGSPSSVSALSPSPFAQSMSPSNGVSHSSMNWQQPNVPTLHLPGSNLQSSRLRSSLNARDMPLEGLNVHHPDFDNQQRILNDMNCFSQPRPSAVSVSRSGWTQTLTPNNLEELFSSEISSSPRFSDPAANVFSPTRKSSLLNQFQQQQQNMLSPINTSMMSPKNVDHPLLQASFGVSSPGRMSPRSTEPLSPMGSRFSAYVQREKQQHLRTLSSRELGSNVPSSLIGSPVNSMPKWGSPNGKVDWSVGRNELGQLRRSSSFEMGNNGEEPDLSWVQSLVKESPPEMLKEKLAVSGMGAAAASGEGLTTTKSQLESTDHSVIGAWLEQMQLDQLVV 728
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 15406189 15410301 + Hsped.02g12330.1 Hepe02g1233 562734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g1233 728 SMART ANK_2a 117 149 IPR002110 GO:0005515(InterPro)
Hepe02g1233 728 SMART ANK_2a 82 112 IPR002110 GO:0005515(InterPro)
Hepe02g1233 728 SUPERFAMILY Ankyrin repeat 39 160 IPR036770 -
Hepe02g1233 728 ProSiteProfiles Ankyrin repeat profile. 117 152 IPR002110 GO:0005515(InterPro)
Hepe02g1233 728 SMART c3hfinal6 334 357 IPR000571 GO:0046872(InterPro)
Hepe02g1233 728 SMART c3hfinal6 299 325 IPR000571 GO:0046872(InterPro)
Hepe02g1233 728 MobiDBLite consensus disorder prediction 1 26 - -
Hepe02g1233 728 MobiDBLite consensus disorder prediction 608 628 - -
Hepe02g1233 728 FunFam Zinc finger CCCH domain-containing protein 66 257 325 - -
Hepe02g1233 728 MobiDBLite consensus disorder prediction 608 638 - -
Hepe02g1233 728 Gene3D - 5 207 IPR036770 -
Hepe02g1233 728 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 303 324 IPR000571 GO:0046872(InterPro)
Hepe02g1233 728 ProSiteProfiles Zinc finger C3H1-type profile. 304 326 IPR000571 GO:0046872(InterPro)
Hepe02g1233 728 MobiDBLite consensus disorder prediction 404 423 - -
Hepe02g1233 728 ProSiteProfiles Ankyrin repeat region circular profile. 117 151 - -
Hepe02g1233 728 MobiDBLite consensus disorder prediction 196 231 - -
Hepe02g1233 728 MobiDBLite consensus disorder prediction 1 27 - -
Hepe02g1233 728 Gene3D - 299 362 - -
Hepe02g1233 728 PANTHER UNKEMPT FAMILY MEMBER 72 676 IPR045234 -
Hepe02g1233 728 Pfam Ankyrin repeats (3 copies) 74 151 IPR002110 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1233 Hepe-Chr2:15406189 Hepe05g0577 Hepe-Chr5:8188247 1.48e-294 dispersed
Hepe02g1233 Hepe-Chr2:15406189 Hepe08g0724 Hepe-Chr8:6521381 7.26e-149 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55023 PF12796 Ank_2 2.10E-10 CL0465 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g1233 - - - 0.0