Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g1286 ATGGAGAAGAAGACTTATCCGATTCGTGAAGATTCTTATGTTCTGTATGAGGAGATTGGCCAGGGAGTCAGTGCTGCAGTTCACCGTGCTCTGTGTATACCTCTTAATGAGATCGTTGCCATCAAGATCCTCGATTTTGAGCGTGAGAATTGTGATCTGGCTAGCATTTATCGTGAAGTACAGACAATGATCTTGGTTGACCACCCGAATGTCCTTAAATCACACTGCTCCTTTGTCAATGGCCATAATTTGTGGATTGTTATGCCCTACATGTCTGGAGGTTCATGTCTTCACATATTGAAGGCTGCATTTCCTGATGGTTTTGAGGAAGTGCTCATAGCAACAATATTACGAGAAGTATTGAAGGGGCTTGAATATCTTCATAATCATGGACATATACATCGGGATGTAAAAGCAGGGAATGTTCTTATTGATTCACGTGGTGCAATCAAGCTAGGGGATTTTGGTGTTTCTGCTTGCCTTTTTGATTCAGGTGATAGGCAACGTGTGAGGAATACATTCGTGGGGACACCTTGCTGGATGGCACCTGAGGTTATGGAGCAATTAAATGGTTATGACTTCAAGGCTGACATTTGGTCTTTTGCCATAACTGGGTTAGAGCTTGCCCATGGTCATGCTCCTTTCTCAAAATATCCTCCGATGAAGGTACTGATGATGACGTTGCAAAATGCACCTCCTGGCCTTGATTATGAGAGGGATAGAAAATTTTCAAAGTGTTTTAAGCAAATGATTGCTAGTTGCTTGGTAAAAGATCCTTCAAAACGACCTTCTGCAACTAAGTTGCTAAAGCATTCATTTTTTAAGCAAGCCCGATCAAATGATTATATTGTACGTATCCTTTTGGAAGGGCTACCTGTTCTTGGTGATCGTATAAAGGCACTTAAGAGAAAAGAAGAAGATATGCTTGCACAAAAGAAAATGCCAGATGGAAAGAAGGAAGAATTATCACAGAATGAATATAAACGAGGAATCAGTGGATGGAACTTCAATCTTGATGATTTAAAGGCACAGGCATCTCTGGTACTGATTCAGGAATTTGAAGAGTCTATAAGTGAAATCAGTGAAGGAGGGAGCTCGAATTCCTTATCTGCACTTGATGTGCAAGAAAAGAAATTACACTGCCAAAATTCTTCAGAAATTTCAGATACTGAAGAGAATGGCATGCTGCGGAGACAACCCTCCATGAAAGCTAATGACACAGTAGATGGTAAAAAATCTGTCAATGACTCAACAATTATTGGTTCTTGCTCTCAATATCAGTCTTCATCCCACAATGATAATCAAACTGAGAATGACTCCAGTGAAGAGCTTCATTTGGAGAACAGCAAAAGAATTTTGGGGAATGCTCCTAATAGTAGCCAACATAAAAGAAGTATTTCTTCTAATCCCGCTGTTCAGCAAGAAGTCTGTTCGCCGGTGAACAGAAGAGATAGTTATGAGGCAGAAAAGAATGTTGCAAATGGCAGTGTTGCAATTGGAATAACTTCTCAGGTGGTAGATGATGTGCTTTCTGATTCTCTTTCTAAAGATCCCAAGTCAGCATTAAGTCCTGCAACAAATGACGAGGAACAGGATGAGAAAGCAAAGGTACCAGTTATTCAGCAGAAAGGGCGTTTCAAAGTTACTTCGGAGAATGTTGATGTCGATAAGGCAGTTCCATCCCCTATTCTGCAAAAAAGTCACAGTATGCAGGTGATTACCTCAAATTGTGCTACTCCTCTACCTTCTAATCTACCAAGTCCACAACTGACACCTGTACCATCATCTGATGCTATACCAATTAATACTAGATGTTCTATGTTTCCAGTGTTGCAATCTGTTTTGCAGACAAATATTGTTCAAAGGGATGATATTTTGACTCTAATGAAGCAAATCTCGATCGGAGAATTTCCAGCTGAGGGTGTAGTTGATGTCTCAACGGCACAAATAACAGCGACGGAGAAATCTTTGCTTGAAGCAGCTCATGAAAGGGAGAAGGATTTACTTAACGAAGTAACTGATTTACAGTGGAGGGTATTACGTGCAAGAGATGAAATCCAAAGATTAAAATTAAACAATGCAGGTTAA 2088 40.23 MEKKTYPIREDSYVLYEEIGQGVSAAVHRALCIPLNEIVAIKILDFERENCDLASIYREVQTMILVDHPNVLKSHCSFVNGHNLWIVMPYMSGGSCLHILKAAFPDGFEEVLIATILREVLKGLEYLHNHGHIHRDVKAGNVLIDSRGAIKLGDFGVSACLFDSGDRQRVRNTFVGTPCWMAPEVMEQLNGYDFKADIWSFAITGLELAHGHAPFSKYPPMKVLMMTLQNAPPGLDYERDRKFSKCFKQMIASCLVKDPSKRPSATKLLKHSFFKQARSNDYIVRILLEGLPVLGDRIKALKRKEEDMLAQKKMPDGKKEELSQNEYKRGISGWNFNLDDLKAQASLVLIQEFEESISEISEGGSSNSLSALDVQEKKLHCQNSSEISDTEENGMLRRQPSMKANDTVDGKKSVNDSTIIGSCSQYQSSSHNDNQTENDSSEELHLENSKRILGNAPNSSQHKRSISSNPAVQQEVCSPVNRRDSYEAEKNVANGSVAIGITSQVVDDVLSDSLSKDPKSALSPATNDEEQDEKAKVPVIQQKGRFKVTSENVDVDKAVPSPILQKSHSMQVITSNCATPLPSNLPSPQLTPVPSSDAIPINTRCSMFPVLQSVLQTNIVQRDDILTLMKQISIGEFPAEGVVDVSTAQITATEKSLLEAAHEREKDLLNEVTDLQWRVLRARDEIQRLKLNNAG 695
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 16084032 16091915 + Hsped.02g12860.1 Hepe02g1286 562787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g1286 695 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 694 IPR047173 GO:0043539(InterPro)
Hepe02g1286 695 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524(InterPro)
Hepe02g1286 695 Pfam Protein kinase domain 13 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g1286 695 Coils Coil 672 692 - -
Hepe02g1286 695 SMART serkin_6 13 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g1286 695 Gene3D Phosphorylase Kinase; domain 1 2 89 - -
Hepe02g1286 695 ProSiteProfiles Protein kinase domain profile. 13 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g1286 695 MobiDBLite consensus disorder prediction 452 479 - -
Hepe02g1286 695 SUPERFAMILY Protein kinase-like (PK-like) 11 275 IPR011009 -
Hepe02g1286 695 Gene3D Transferase(Phosphotransferase) domain 1 94 325 - -
Hepe02g1286 695 FunFam serine/threonine-protein kinase BLUS1 isoform X1 94 327 - -
Hepe02g1286 695 FunFam Serine/threonine-protein kinase BLUS1 2 90 - -
Hepe02g1286 695 MobiDBLite consensus disorder prediction 380 479 - -
Hepe02g1286 695 CDD STKc_OSR1_SPAK 11 274 - -
Hepe02g1286 695 MobiDBLite consensus disorder prediction 406 435 - -
Hepe02g1286 695 MobiDBLite consensus disorder prediction 514 536 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1286 Hepe-Chr2:16084032 Hepe06g0942 Hepe-Chr6:57015303 7.15e-158 dispersed
Hepe02g1286 Hepe-Chr2:16084032 Hepe02g1817 Hepe-Chr2:27204815 2.13e-177 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72554 PF00069 Pkinase 4.50E-58 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g1286 K08835 - csv:101211076 1167.53