Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g1289 ATGGCGGATCTCAAAGAGCGGTTGCTTCCTCCAAAACCTGCATCTGCTATAAATGTTAGGGAGGCAATTAATAATCGACCATCAGCCTCTGGAAGAGTGCCTTTTCAAGGTGTGGATGTTCTAGGGCTGAAGAAGCGAGGTCAGGGACTTAGATCTTGGATCCGGGTAGATTCCTCTGGGAACTCTCAGATTATTGAGGTTGATAAGTTCACCATGATGCGTCGTTGTGATCTACCTGCGCGAGATTTGCGCTTGCTTGATCCTTTGTTTGTTTACCCTTCAACAATTCTTGGTAGAGAGAAGGCTATTGTGGTTAATCTAGAGCAGATTCGATGTATTATAACAGCTGACGAAGTTTTGCTGTTAAATTCCCTTGATAGTTATGTATTGCAGTATGTGGTAGAGCTACAAAGGCGATTGAAAACCACTGGGGTTGATGAGGTTTGGCAGAATGATGGAAATCATGGAGCTGATTTAAATCGAAGAAGGGGAAGTAGGAATTTCGATAATGTATTTGGAAACACCTCTCCTGATTATTTGCCCTTTGAGTTTAGAGCTTTAGAAGTTGCTTTGGAGGCAGCTTGTACATTTCTTGATTCCCAGGCTGCAGAATTAGAAATTGAAGCATACCCGTTACTAGATGAACTTACGTCAAAAATCAGTACATTAAATTTGGAGCGGGTCCGTCGCTTGAAAAGCAGACTTGTTGCCCTGACTCGTAGGGTTCAGAAGGTTAGGGATGAAATAGAGCAGCTCATGGATGATGATGGAGATATGGCAGAAATGTATCTTACCGAGAAGAAAATGAGAATGGAGTCCTTTGCTTATGGCGATCAGTCTGTGACTGGATACAGATCAATTGATGGAGCATCTATTTCTGCTCCTGTTTCTCCTGTATCTTCACCGCCCGAAAGTCGCAAGCTTGAGAAGAGCCTGAGCATTGCTAGGAGCCGGCATGAGAGCATGAGAAGTTCAGAAAGTGCCACTGAAAATATAGAGGAGCTTGAGATGCTTCTTGAAGCATATTTTGTTGTCATTGATAGCACCCTGAACAAGTTAACATCGTTGAAGGAGTACATCGATGATACAGAGGATTTCATCAACATCCAGTTGGATAATGTACGGAATCAGTTGATCCAGTTTGAGCTACTACTCACAACTGCAACATTTGTTGTTGCCATTTTTGGGGTGGTAGCTGGAATTTTTGGCATGAATTTTGAAATACCAATGTTTGGGAATCCTGAAGCATTCAAGTGGGTCCTTGTAATTACAGGAGTAACTGGAATTATCATATTTTCTGCATTTGTTTGGTTTTTCAGATACAAAAGACTGATGCCACTTTAA 1344 41.96 MADLKERLLPPKPASAINVREAINNRPSASGRVPFQGVDVLGLKKRGQGLRSWIRVDSSGNSQIIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLQYVVELQRRLKTTGVDEVWQNDGNHGADLNRRRGSRNFDNVFGNTSPDYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKMRMESFAYGDQSVTGYRSIDGASISAPVSPVSSPPESRKLEKSLSIARSRHESMRSSESATENIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFEIPMFGNPEAFKWVLVITGVTGIIIFSAFVWFFRYKRLMPL 447
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 16151263 16155650 + Hsped.02g12890.1 Hepe02g1289 562790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g1289 447 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 36 444 IPR039204 GO:0015095(PANTHER)|GO:0015693(PANTHER)
Hepe02g1289 447 Pfam Magnesium transporter MRS2-like 326 375 - -
Hepe02g1289 447 Pfam Magnesium transporter MRS2-like 57 271 - -
Hepe02g1289 447 CDD Mrs2_Mfm1p-like 53 444 IPR039204 -
Hepe02g1289 447 MobiDBLite consensus disorder prediction 294 327 - -
Hepe02g1289 447 FunFam Magnesium transporter MRS2-1 41 124 - -
Hepe02g1289 447 Gene3D - 41 124 - -
Hepe02g1289 447 Coils Coil 228 255 - -
Hepe02g1289 447 FunFam Magnesium transporter MRS2-1 385 445 - -
Hepe02g1289 447 Gene3D Magnesium transport protein CorA, transmembrane region 385 445 - -
Hepe02g1289 447 MobiDBLite consensus disorder prediction 309 327 - -
Hepe02g1289 447 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 384 437 IPR045863 -
Hepe02g1289 447 Gene3D Magnesium transport protein CorA, transmembrane region 125 378 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0661 Hepe-Chr2:7077724 Hepe02g1289 Hepe-Chr2:16151263 9.83e-102 dispersed
Hepe02g1289 Hepe-Chr2:16151263 Hepe10g0575 Hepe-Chr10:6876209 1.06e-127 dispersed
Hepe02g1289 Hepe-Chr2:16151263 Hepe03g0248 Hepe-Chr3:3170359 6.98e-105 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g1289 K16075 - csv:101217419 807.364