Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g1294 | ATGGATCTTGACAGGAAGGTTTCTGTTAAAGAAGAGACTGGTGCTTTAATGGAGGAATTGAAGAGGGTGAGTGCAGAGAATAAGAAATTGACTGAAATGTTGACTGTTGTGTGTGAAAATTACAACACTTTGAGAGGTCATTTGGTGGAACAAATGAACAAAAATGGGGAAATTAAGGAGATTTCTTCTGTAAAGAAGAGGAAATCTGTAAGTAGTAACAATAATATGGTTGGAATGAATGGGAATTCTGAGAGTAGTTCAACTGATGAAGAGTCTTACAAGAAACCAAAAGAGGAAACCATTAACAAATCTTCTAAAACCACTAGAGTTCAAGTCAAAATTGGAGCTTCTGATTCTAATCTGGTTGTTAAAGATGGATATCAATGGAGGAAATATGGCCAAAAGGTCACTAGAGATAATCCTTGTCCTAGAGCTTATTTCAAGTGCTCTTTTGCTCCTAGCTGCCCTGTGAAGAAGAAGGTTCAAAGAAGTGTAGAAGATCAATCAATTCTGGTAGCCACATACGAAGGCGAACACAACCATCCACACCCATCTCAGATCGAGGCCACATCCAGCGGCGGCGGCGCTCGTAGCTTGAGCGTAACTCCGGCGGCGCTTACGGTGGCTCCGGGATCTTCGTCGGTGCCGGCAATTTCCCACGACATGGCAAAGCCCAAGCCAACCACCGAAGCTAAAACCATCTTCAACCCAAAATTCGACTCGCCGGAACTGCAACAATTTCTCGTCGAACAGATGGCCTCTTCCTTAACGAAAGACCCCAATTTCACGGCGGCGCTCGCGGCGGCGATTTCGGGAAAAATATTCCCACATTAA | 834 | 44.12 | MDLDRKVSVKEETGALMEELKRVSAENKKLTEMLTVVCENYNTLRGHLVEQMNKNGEIKEISSVKKRKSVSSNNNMVGMNGNSESSSTDEESYKKPKEETINKSSKTTRVQVKIGASDSNLVVKDGYQWRKYGQKVTRDNPCPRAYFKCSFAPSCPVKKKVQRSVEDQSILVATYEGEHNHPHPSQIEATSSGGGARSLSVTPAALTVAPGSSSVPAISHDMAKPKPTTEAKTIFNPKFDSPELQQFLVEQMASSLTKDPNFTAALAAAISGKIFPH | 277 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 16263377 | 16265490 | - | Hsped.02g12940.1 | Hepe02g1294 | 562795 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g1294 | 277 | ProSiteProfiles | WRKY domain profile. | 118 | 184 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe02g1294 | 277 | SUPERFAMILY | WRKY DNA-binding domain | 121 | 184 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe02g1294 | 277 | SMART | WRKY_cls | 123 | 183 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe02g1294 | 277 | MobiDBLite | consensus disorder prediction | 62 | 106 | - | - | |
Hepe02g1294 | 277 | MobiDBLite | consensus disorder prediction | 67 | 87 | - | - | |
Hepe02g1294 | 277 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 12 | 271 | IPR044810 | GO:0003700(InterPro) | |
Hepe02g1294 | 277 | MobiDBLite | consensus disorder prediction | 88 | 104 | - | - | |
Hepe02g1294 | 277 | FunFam | WRKY transcription factor 40 | 108 | 185 | - | - | |
Hepe02g1294 | 277 | Gene3D | WRKY domain | 106 | 185 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe02g1294 | 277 | Pfam | WRKY DNA -binding domain | 124 | 182 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g1294 | Hepe-Chr2:16263377 | Hepe10g0218 | Hepe-Chr10:2209337 | 2.30e-52 | dispersed | |
Hepe01g1969 | Hepe-Chr1:84469385 | Hepe02g1294 | Hepe-Chr2:16263377 | 8.40e-60 | wgd | |
Hepe02g1294 | Hepe-Chr2:16263377 | Hepe08g1152 | Hepe-Chr8:11676588 | 2.51e-17 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55028 | PF03106 | WRKY | 2.70E-23 | CL0274 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g1294 | - | - | - | 0.0 |