Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe02g1296 | ATGGAGATAGCAAATGGGTTGTGTTTGTTTGTTTGTTTACTCTCATCTTTATCTTTATTTCTAGCTGATTTCAGATTCTATTTCGTTTCAAAAAGAGGGAATCAGAAGAGGAGCAATAAAATGGCCGCTGGAGGGCCTAATTCTGGGCAGCCACAGTTCCTTTCTAGGGCTGGAGATGAGAATTTTTCGCATGCGCCGTTGATCGAGAACCCGGAATATGATCAGATTGTTGTTCCTGATAAGAAAAGCTGGAAGAACCTTTTTGCTTACATGGGCCCGGGATTTCTTGTCTCTATTGCCTATATTGATCCTGGGAATTTTGAAACTGATCTACAAGCTGGAGCACAGTACAAGTATGGGTTGCTTTGGATCATATTAGTGGCTTCTTGTGCTGCCCTCGTCATTCAATCCTTAGCAGCTAATCTAGGAGTTGTCACAGGAAAACATTTAGCAGAGCACTGTAAAGCTGAGTACCCCAAGGTGCAAAATTTCATCCTATGGATCCTTGCTGAAATTGCAATTGTTGCATGTGATATTCCAGAAGTTATAGGAACCGCTTTTGCATTGAATATGCTCTTCAGCATTCCTGTTTGGTGCGGCGTTCTTCTGACAGGGCTTAGTACACTGTTCCTCCTTGCGCTGCAGCAATATGGGATTAGAAAGCTTGAATTCTTGATTGCATTTCTTGTATTGACAATGGCGGTTTGCTTCTTCCTGGAGCTGGGCTATGCAAAGCCTGATGTTGGAGAAATTTTTTATGGGTTATTTGTCCCTCAATTAAAAGGAAGTGGTGCAACTGGTCTTGCAATTTCACTTCTTGGTGCTATGGTTATGCCACACAATCTCTTTCTTCACTCTGCACTGGTGCTCTCTAGGAAAATACCCCGATCCGTTGCTGGCATCAAGGAAGCTTGCAGATTTTATATGATAGAGAGCGGCTTTGCTCTTTTGGTGGCCTTCCTCATTAATGTGTCAGTCATTTCAGTTAGTGGTGCAGTTTGCAATGCCCCTGATCTAAATAAGGAGGACCAAATGAGCTGCAATGACTTGGACTTGAATAAAGCCTCATTTTTATTGAGAAATGTATTGGGTAAATGGAGTTCAAAACTTTTTGCCATTGCTTTGTTAGCATCTGGTCAGAGTTCTACCATAACAGGAACCTATGCAGGACAGTATGTTATGCAGGGGTTTCTTGATTTGAAACTGACGCCATGGGTCAGAAACTTTTTAACCCGAAGCTTAGCAATTGTTCCTAGTTTGATTGTTGCACTCATTGGTGGGTCTTCTGGGGCTGGGAAGTTGATCATTATTGCGTCGATGATTTTGTCATTTGAACTCCCTTTTGCTCTCATTCCCCTTTTGAAGTTTACAAGTAGCAAGACCAAGATGGGATCACACGTCAACTCCACCACGATTACGGTATTGACATGGATCATCGGTTTCCTCATCATGGCTATAAATATATACTACCTGATAACCAGTTTCATCCACGTGCTTCTTCATAATGATCTCCACCTCGTAGCAGTCGTCTTCATAGGTATACTTGGATTTTCAGGCATGGCATTATATTTAGCTGGAATTGCTTATCTGGCTTTGAGAAAGACGACCAAGGACATCACTCCTCTCTTAGCACTAACAACAGAAGAAAGTCGACGACTAAGCAAGGAGCCAAGTATGACATCGGGATATAGTCTCCCGAGTGAAGATATAGTAAGCACGCAGTTGCCTCAAAGAAATAATAATGCAAACTGA | 1752 | 42.18 | MEIANGLCLFVCLLSSLSLFLADFRFYFVSKRGNQKRSNKMAAGGPNSGQPQFLSRAGDENFSHAPLIENPEYDQIVVPDKKSWKNLFAYMGPGFLVSIAYIDPGNFETDLQAGAQYKYGLLWIILVASCAALVIQSLAANLGVVTGKHLAEHCKAEYPKVQNFILWILAEIAIVACDIPEVIGTAFALNMLFSIPVWCGVLLTGLSTLFLLALQQYGIRKLEFLIAFLVLTMAVCFFLELGYAKPDVGEIFYGLFVPQLKGSGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSVAGIKEACRFYMIESGFALLVAFLINVSVISVSGAVCNAPDLNKEDQMSCNDLDLNKASFLLRNVLGKWSSKLFAIALLASGQSSTITGTYAGQYVMQGFLDLKLTPWVRNFLTRSLAIVPSLIVALIGGSSGAGKLIIIASMILSFELPFALIPLLKFTSSKTKMGSHVNSTTITVLTWIIGFLIMAINIYYLITSFIHVLLHNDLHLVAVVFIGILGFSGMALYLAGIAYLALRKTTKDITPLLALTTEESRRLSKEPSMTSGYSLPSEDIVSTQLPQRNNNAN | 583 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 16332563 | 16338251 | + | Hsped.02g12960.1 | Hepe02g1296 | 562797 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe02g1296 | 583 | NCBIfam | Nramp family divalent metal transporter | 92 | 460 | - | - | |
| Hepe02g1296 | 583 | NCBIfam | metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family | 86 | 463 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Hepe02g1296 | 583 | Pfam | Natural resistance-associated macrophage protein-like | 107 | 469 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Hepe02g1296 | 583 | PANTHER | SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER | 74 | 537 | IPR001046 | GO:0005384(PANTHER)|GO:0015086(PANTHER)|GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Hepe02g1296 | 583 | Hamap | Divalent metal cation transporter MntH [mntH]. | 79 | 495 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Hepe02g1296 | 583 | PRINTS | Natural resistance-associated macrophage protein signature | 219 | 240 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Hepe02g1296 | 583 | PRINTS | Natural resistance-associated macrophage protein signature | 269 | 292 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Hepe02g1296 | 583 | PRINTS | Natural resistance-associated macrophage protein signature | 439 | 458 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Hepe02g1296 | 583 | PRINTS | Natural resistance-associated macrophage protein signature | 407 | 424 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Hepe02g1296 | 583 | PRINTS | Natural resistance-associated macrophage protein signature | 379 | 398 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Hepe02g1296 | 583 | PRINTS | Natural resistance-associated macrophage protein signature | 166 | 192 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Hepe02g1296 | 583 | PRINTS | Natural resistance-associated macrophage protein signature | 194 | 213 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe02g1296 | Hepe-Chr2:16332563 | Hepe02g2229 | Hepe-Chr2:63236468 | 6.66e-209 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe02g1296 | K21398 | - | csv:101209649 | 946.421 |