Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g1297 ATGCCGCCGCCAGTCACGTCAGCAGTTTCCGGCGAAACTGTGTGCGTCACCGGAGCCGGCGGCTTCATCGCTTCTTGGCTGGTAAAGCTCCTCCTTCAAAAGGGTTACATCGTCAGAGGAACGGTTAGAAACTCAGATGATCAGAAAAATGCTCATCTGAAAGATTTAGAAGGAGCCAAAGAGAGACTAACGTTGTTCAGTGCCGATCTTCTCGATTACGAAAGTCTCAAAACCGCCATCGTCGGCTGCGATGGCGTTTTCCACACGGCATCGCCGGTGACAGACGACTCAGTCGGTTTTTTTCTCTTTCAATCAAAATTCATTTCTTATTTTTCTGTTTTTCTTTTGGGTTTATTGCATGTACTTTTGGATACACAGGAAAAGGTAGAACAAGCAGTCATCGGAACAAAGAATGTATTGACGGCCGCCGCGACAGCGAAAGTCCGACGGGTGGTTTTCACGTCGTCTATTGGGACAGTGTACATGAACCCTAGCCGCCACCCAAATAAGGTGGTGGATGAGACATGTTGGAGTGATCTCGAATTTTGCAAGAACACCAAGAATTGGTATTGCTATGCAAAGACAGTGGCAGAACAGGCAGCATGGGAAGTGGCAAAAGAAAGAGAAGTGGATTTAGTAGTGGTGAATCCAATGTTGGTTTTGGGGCCTTTGTTGCAAGATGGTGTGAATGCAAGTGTTGTTCATATAATGAAGTATTTGACAGGATCTGCAAAGACATATGTTAATGCTGTTCAAGGTTATGTTGATGTTAAGGATGTTGCAAAGGCTCATGTTTTGGTTTATGAAACTCCTTCAGCCTCGGGCAGATATATTTGTGTTGAAACCATGCTTCATCGTGGAGAATTGGTCGAAATTCTTGCCGAACTCTTTCCAGAATACCCTCTCCCAACCAAGTGTTCAGACGAGGAGAGCCCTAGGAAAAAACCCTACAAATACTCTGTTGAAAAGCTTAAGGCACTCGGCATGGAGTTCACACCAATAAAGCAATGTCTATATGAAACTGTGAAGAGCTTGCAAGAGAAGGGTCATCTTCCACTTCCTATCCAACAACTTTTTCTAATCAAGTAA 1089 44.54 MPPPVTSAVSGETVCVTGAGGFIASWLVKLLLQKGYIVRGTVRNSDDQKNAHLKDLEGAKERLTLFSADLLDYESLKTAIVGCDGVFHTASPVTDDSVGFFLFQSKFISYFSVFLLGLLHVLLDTQEKVEQAVIGTKNVLTAAATAKVRRVVFTSSIGTVYMNPSRHPNKVVDETCWSDLEFCKNTKNWYCYAKTVAEQAAWEVAKEREVDLVVVNPMLVLGPLLQDGVNASVVHIMKYLTGSAKTYVNAVQGYVDVKDVAKAHVLVYETPSASGRYICVETMLHRGELVEILAELFPEYPLPTKCSDEESPRKKPYKYSVEKLKALGMEFTPIKQCLYETVKSLQEKGHLPLPIQQLFLIK 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 16345609 16351439 - Hsped.02g12970.1 Hepe02g1297 562798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g1297 362 FunFam Cinnamoyl-CoA reductase 1 7 357 - -
Hepe02g1297 362 Gene3D - 5 359 - -
Hepe02g1297 362 CDD FR_SDR_e 14 328 - -
Hepe02g1297 362 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 13 344 IPR050425 GO:0016616(PANTHER)
Hepe02g1297 362 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 346 IPR036291 -
Hepe02g1297 362 Pfam NAD(P)H-binding 18 167 IPR016040 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1297 Hepe-Chr2:16345609 Hepe02g1300 Hepe-Chr2:16492509 3.34e-203 dispersed
Hepe02g1297 Hepe-Chr2:16345609 Hepe02g1298 Hepe-Chr2:16359804 4.45e-83 tandem
Hepe02g1297 Hepe-Chr2:16345609 Hepe03g1662 Hepe-Chr3:73479061 6.67e-175 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g1297 K09753 - csv:116401668 558.14