Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe02g1298 | ATGCCGATCGATACCTCTCCAGTTTCCGGCGAAATCGTTTGTGTCACCGGCGCCGGAGGCTTCATTGCTTCTTGGCTTGTGAAGCTCCTTCTTGAGAAGGGCTACACTGTTAGAGGAACTGTTAGAAACCCAGATGACCAAAAGAATGCTCATTTGAAGGCCTTGGAAGGAGCTAATGAACGCTTGTCTTTGTTCAGTGCTGATCTTCTTGATTTTGAGAGCCTTAAAGCAGCCATTATGGGTTGTGATGGTGTTTTCCACACCGCGTCTCCGGTGACTGATGATCCCGAAAAGGTGGAGCAGGCCATAATCGGGACAAAGAACGTCATGACCGCCGCCGCCGAAGCAAAAGTCAGACGTGTCGTGTTCACATCGTCGATCGGAACCGTGTACATGAACCCTAACCGGAGCCCAGACATGGTGGTGGATGAGTCTTGTTGGAGTGACCTTGAGTTTTGCAAGAACACCAAGCGGTTTGTTGACTTGTTGATCTTGAAAGTTGTTGATCTTTGGAGCGCGTATGTTTGTTTTGGGCTGGTTGATTTCTTGGATCGGCATGTCCTGTTTTTCTTGAAATTGTTTATCTTTGGAGCGGATGGTGTTTTTCTTGAACTTGTTTATCTTTGGAGCGGATGGTCTTTGATGCCTTTGAATTCTCTGATTGCGGTAGCTTCTGACTTTTCTGGATTCTAG | 693 | 47.19 | MPIDTSPVSGEIVCVTGAGGFIASWLVKLLLEKGYTVRGTVRNPDDQKNAHLKALEGANERLSLFSADLLDFESLKAAIMGCDGVFHTASPVTDDPEKVEQAIIGTKNVMTAAAEAKVRRVVFTSSIGTVYMNPNRSPDMVVDESCWSDLEFCKNTKRFVDLLILKVVDLWSAYVCFGLVDFLDRHVLFFLKLFIFGADGVFLELVYLWSGWSLMPLNSLIAVASDFSGF | 230 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 16359804 | 16363323 | - | Hsped.02g12980.1 | Hepe02g1298 | 562799 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe02g1298 | 230 | PANTHER | NAD DEPENDENT EPIMERASE/DEHYDRATASE | 13 | 156 | IPR050425 | GO:0016616(PANTHER) | |
| Hepe02g1298 | 230 | FunFam | NAD(P)-binding Rossmann-fold superfamily protein | 4 | 108 | - | - | |
| Hepe02g1298 | 230 | Pfam | NAD(P)H-binding | 17 | 135 | IPR016040 | - | |
| Hepe02g1298 | 230 | Gene3D | - | 4 | 167 | - | - | |
| Hepe02g1298 | 230 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 6 | 161 | IPR036291 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe02g1298 | Hepe-Chr2:16359804 | Hepe02g1300 | Hepe-Chr2:16492509 | 3.94e-106 | dispersed | |
| Hepe02g1297 | Hepe-Chr2:16345609 | Hepe02g1298 | Hepe-Chr2:16359804 | 4.45e-83 | tandem | |
| Hepe02g1298 | Hepe-Chr2:16359804 | Hepe02g1299 | Hepe-Chr2:16477331 | 2.93e-110 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe02g1298 | K09753 | - | csv:116401668 | 290.812 |