Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g1299 ATGCCGATCGATACCTCTCCAGTTTCCGGCGAAATCGTTTGTGTCACCGGCGCCGGAGGCTTCATTGCTTCTTGGCTTGTGAAGCTCCTTCTTCAGAAGGGCTACACTGTTAGAGGAACTGTTAGAAACCCAGATGACCAAAAGAATGCTCATTTGAAGGCCTTGGAAGGAGCTAATGAACGTTTGTCTTTGTTCAGTGCTGATCTTCTTGATTTTGAGAGCCTTAAAGCAGCCATTATGGGCTGTGATGGTGTTTTCCACACCGCGTCTCCGGTGACTGATGATCCCGAAAAGGTGGAGCAGGCCATAATCGGGACAAAGAACGTCATGACCGCCGCCGCCGAAGCAAAAGTCAGACGTGTCGTGTTCACATCGTCGATCGGAACCGTGTACATGAACCCTAACCGGAGCCCAGACATGGTGGTGGATGAGTCTTGTTGGAGTGACCTTGAGTTTTGCAAGAACACCAAGAATTGGTATTGCTATGCAAAGACAGTGGCCGAACAGGCAGCATGGGAAGTGGCAAAAGAAAGAGAAGTGGATTTAGTAGTGGTGAATCCAATGTTGGTTTTGGGGCCTTTGTTGCAAGATGGTGTGAATGCAAGTGTTGTTCATATAATGAAGTATTTGACAGGATCTGCAAAGACATATGTTAATGCTGTTCAAGGTTATGTTGATGTTAAGGATGTTGCAAAGGCTCATGTTTTGACATCTGCTTGCAAAAACAAACTTTAA 735 46.26 MPIDTSPVSGEIVCVTGAGGFIASWLVKLLLQKGYTVRGTVRNPDDQKNAHLKALEGANERLSLFSADLLDFESLKAAIMGCDGVFHTASPVTDDPEKVEQAIIGTKNVMTAAAEAKVRRVVFTSSIGTVYMNPNRSPDMVVDESCWSDLEFCKNTKNWYCYAKTVAEQAAWEVAKEREVDLVVVNPMLVLGPLLQDGVNASVVHIMKYLTGSAKTYVNAVQGYVDVKDVAKAHVLTSACKNKL 244
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 16477331 16479098 - Hsped.02g12990.1 Hepe02g1299 562800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g1299 244 CDD FR_SDR_e 13 236 - -
Hepe02g1299 244 Gene3D - 4 243 - -
Hepe02g1299 244 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 13 237 IPR050425 GO:0016616(PANTHER)
Hepe02g1299 244 FunFam Dihydroflavonol reductase 10 242 - -
Hepe02g1299 244 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 236 IPR036291 -
Hepe02g1299 244 Pfam NAD dependent epimerase/dehydratase family 13 236 IPR001509 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1299 Hepe-Chr2:16477331 Hepe02g1301 Hepe-Chr2:16508689 5.53e-143 dispersed
Hepe02g1298 Hepe-Chr2:16359804 Hepe02g1299 Hepe-Chr2:16477331 2.93e-110 tandem
Hepe02g1299 Hepe-Chr2:16477331 Hepe02g1300 Hepe-Chr2:16492509 8.43e-166 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g1299 K09753 - csv:116401668 437.187