Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe02g1300 | ATGCCAATTGATAACTCTCCAGTTTCCGGCCAAGTTGTGTGTGTCACCGGCGCCGGAGGCTTCATTGCTTCTTGGCTCGTGAAGCTACTCCTTGAGAAGGGCTACACTGTTAGAGGAACTGTTAGAAACCCAGATGACCAAAAGAATGCTCATTTGAAGGCCTTGGAAGGAGCTAATGACCGCTTGTCTTTGTTCAGTGCTGATCTTCTTGATTTTGAGAGCCTTAAAGTAGCCATTATGGGTTGTGATGGTGTTTTCCACACCGCGTCTCCGGTGACTGATGATCCCGAAAAGGTGGAGCAAGCCATAATCGGGACAAAGAACGTCATGACCGCTGCCGCCGAAGCAAAAGTCCGCCGCGTGGTGTTCACGTCATCGATCGGTACCGTATACATGAACCCTAATCGGAGCCCGGACACGGTAGTGGATGAGTCTTGTTGGAGTGATCTTGAGTTTTGCAAGAACACCAAGAATTGGTATTGTTATGCAAAGACAGTGGCAGAACAAGCAGCATGGGAAGTGGCAAAAGAAAGAGAAATTGATTTAGTAGTTGTGAATCCAATGTTGGTTTTGGGGCCTTTGTTGCAAGATGGTGTGAATGCAAGTGTTGTTCATATAATGAAGTATTTGACAGGATCTGCAAAGACATATGTTAATGCTGTTCAAGGTTATGTTGATGTTAAGGATGTTGCAAAAGCTCATGTTTTGGTTTATGAAACTCCTTCAGCCTCAGGCAGATATATTTGTGTTGAGAGCATGCTTCATCGCGGAGAATTAGTTGATATTCTTGCCAAGTTTTTTCCCGAATATCCCATTCCCATGAAGTGTTCTGATGAGGTGAATCCCAAGAAGAAACCCTACAAATACACTGTTGAGAAGCTGAAGTCATTGGGAATGGAGTTCACACCAATCAAACAATGCATATATGAAACTGTGAGGAGCTTGCAAGAGAAGGGTCATCTTCCACTTCCTACCCAACTTCAACAATGA | 990 | 44.44 | MPIDNSPVSGQVVCVTGAGGFIASWLVKLLLEKGYTVRGTVRNPDDQKNAHLKALEGANDRLSLFSADLLDFESLKVAIMGCDGVFHTASPVTDDPEKVEQAIIGTKNVMTAAAEAKVRRVVFTSSIGTVYMNPNRSPDTVVDESCWSDLEFCKNTKNWYCYAKTVAEQAAWEVAKEREIDLVVVNPMLVLGPLLQDGVNASVVHIMKYLTGSAKTYVNAVQGYVDVKDVAKAHVLVYETPSASGRYICVESMLHRGELVDILAKFFPEYPIPMKCSDEVNPKKKPYKYTVEKLKSLGMEFTPIKQCIYETVRSLQEKGHLPLPTQLQQ | 329 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 16492509 | 16494357 | - | Hsped.02g13000.1 | Hepe02g1300 | 562801 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe02g1300 | 329 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 6 | 316 | IPR036291 | - | |
| Hepe02g1300 | 329 | CDD | FR_SDR_e | 13 | 298 | - | - | |
| Hepe02g1300 | 329 | FunFam | Cinnamoyl-CoA reductase 1 | 4 | 329 | - | - | |
| Hepe02g1300 | 329 | PANTHER | NAD DEPENDENT EPIMERASE/DEHYDRATASE | 12 | 313 | IPR050425 | GO:0016616(PANTHER) | |
| Hepe02g1300 | 329 | Pfam | NAD dependent epimerase/dehydratase family | 13 | 244 | IPR001509 | - | |
| Hepe02g1300 | 329 | Gene3D | - | 4 | 329 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe02g1297 | Hepe-Chr2:16345609 | Hepe02g1300 | Hepe-Chr2:16492509 | 3.34e-203 | dispersed | |
| Hepe02g1298 | Hepe-Chr2:16359804 | Hepe02g1300 | Hepe-Chr2:16492509 | 3.94e-106 | dispersed | |
| Hepe02g1300 | Hepe-Chr2:16492509 | Hepe03g1662 | Hepe-Chr3:73479061 | 6.12e-188 | dispersed | |
| Hepe02g1299 | Hepe-Chr2:16477331 | Hepe02g1300 | Hepe-Chr2:16492509 | 8.43e-166 | tandem | |
| Hepe02g1300 | Hepe-Chr2:16492509 | Hepe02g1301 | Hepe-Chr2:16508689 | 1.19e-201 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe02g1300 | K09753 | - | csv:116401668 | 614.379 |