Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g1301 ATGCCCCTCCCCGCCACCGCCACCACCGTAGCTTCCGGTCAAACCGTTTGTGTCACCGGCGCCGGAGGCTTCATTGCCTCTTGGCTTGTGAAGCTCCTTCTCCAAAAGGGTTACTTTGTTAGAGGCACTGTTAGAAACCCAGATGATCCGAAGAATGCTCATTTGAAAGAGCTGGATGGAGCTAAGGAAAGCCTGACACTGTACGGTGGTGATCTTCTTGATTTTGAGAGTCTTAAAGCTGCCATTATCGGTTGTGATGGTGTTTTCCACACGGCATCTCCGGTAACTGATGACCCGGGAAAGGTGGAGCAAGCAATAATCGGGACAAAGAATGTCATAATGGCGGCAGCAGAGGCCAAGGTACGACGGGTCGTGTTCACATCATCGATCGGAACTGTATACATGAACCCTAATCGGAGCCCTGACACAGTAGTAGATGAGTCTTGTTGGAGTGACCTTGACTTTTGCAAAAACACAAAGAATTGGTATTGTTATGCAAAAACAGTGGCAGAGCAAACAGCATGGGCAATGGCAGAGGAGAAAGAGGTGGATTTAGTGGTGGTGAATCCAATGTTGGTGCTTGGACCATTATTACAAGGAACAATAAATGCAAGTGTAGCTCATATAATGAAGTACTTGACAGGATCTGCAAACACATATGTTAATGAAGTACAAGGTTATGTTGATGTTAAGGATGTCGCAAAAGCACACTTGTTGGTTTATGAGACACCCTCGGCCTTTGGTAGATATATTTGTGTTCAAACTATGCTTCATCGGGAAGATTTGGTTCAAATTTTGGCTAAGTTCTTCCCCGAGTATCCCGTTCCATCCAAGTGCTCTGACCAGATAAACCCGAAGAAAAAACCCTACAAATATAGTGTAAAAAAACTCGAGGATTTGGGCATGGAGTTCATACCTGTGAAGCAATGCATATATGAAACTGTGAAGAGCCTTCAAGAGAAGGGCCATCTTCCACTTCCAACTTGA 987 45.19 MPLPATATTVASGQTVCVTGAGGFIASWLVKLLLQKGYFVRGTVRNPDDPKNAHLKELDGAKESLTLYGGDLLDFESLKAAIIGCDGVFHTASPVTDDPGKVEQAIIGTKNVIMAAAEAKVRRVVFTSSIGTVYMNPNRSPDTVVDESCWSDLDFCKNTKNWYCYAKTVAEQTAWAMAEEKEVDLVVVNPMLVLGPLLQGTINASVAHIMKYLTGSANTYVNEVQGYVDVKDVAKAHLLVYETPSAFGRYICVQTMLHREDLVQILAKFFPEYPVPSKCSDQINPKKKPYKYSVKKLEDLGMEFIPVKQCIYETVKSLQEKGHLPLPT 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 16508689 16514643 - Hsped.02g13010.1 Hepe02g1301 562802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g1301 328 Pfam NAD dependent epimerase/dehydratase family 16 246 IPR001509 -
Hepe02g1301 328 CDD FR_SDR_e 16 301 - -
Hepe02g1301 328 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 15 317 IPR050425 GO:0016616(PANTHER)
Hepe02g1301 328 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 319 IPR036291 -
Hepe02g1301 328 FunFam Cinnamoyl-CoA reductase 1 7 328 - -
Hepe02g1301 328 Gene3D - 6 328 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1299 Hepe-Chr2:16477331 Hepe02g1301 Hepe-Chr2:16508689 5.53e-143 dispersed
Hepe02g1301 Hepe-Chr2:16508689 Hepe03g1662 Hepe-Chr3:73479061 2.94e-181 dispersed
Hepe02g1300 Hepe-Chr2:16492509 Hepe02g1301 Hepe-Chr2:16508689 1.19e-201 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g1301 K09753 - csv:101219069 584.719