Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g1303 ATGGATGCAGAGGAAGCTCCGTCGACACCGGTGACGCCCGGGACGCCCGGAGCTCCGCTTTTTGGAGGACACAAGGGAAATCACCATGGAAGTGAGCATGGTAAAAGATCTCTTCTCAAAAGTTGCATCTCTTTCAATGTTGATGATTGGGGCACTGAAGTCTCTTGTTCAATTCCACCCCCTCCTATCTCACTTGCAAGAAAGGTGGGAGCGGAGTTCATAGGCACTTTGATGCTCATCTTTTCCGGAACCGCCACCGCCATCGTGAACCAGAAGACGGAAGGAACCGAAACACTCATCGGTCTAGCGGCGTCCACCGGCCTCGCAGTGATGATTGTCATCTTGTCGACCGGCCACATCTCCGGAGCCCATCTGAACCCGGCCATCACGATTGCTTTCGCTGCATTGAAGCACTTTCCATGGAAGCATGTGCCAGTGTATATTGGAGCTCAAATGGTGGCTTCTTTGTGTTCTTCATTTGCATTGAAATGGATCTTTGATCCCATAATGGGCGGAGGAGTGACTGTTCCTTCATGTGGATATGCTCAAGCTTTTACTCTTGAATTTATCATTAGCTTCAACCTTATGTTTGTCATCACCGCGGTCGCCACTGATACTCGGGCTGTGGGAGAGTTGGCGGGAATCGCGGTAGGAGCAACAGTCATGCTCAATGTACTCATCGCCGGACAAACAACAGGAGCTTCAATGAATCCAGTGAGAACACTGGGGCCAGCCATTGCTGCAAACAATTTTAGAGCCATATGGATTTACCTCACAGCTCCCATTCTAGGGACATTGTGTGGAGCTGGAATTTACACTGCAGTTAAGTTGCCCAACGAAGATGGCGATGCACGTGTGCCTTCTACTGCACGAAGCTTTCGAAGATGA 888 50.11 MDAEEAPSTPVTPGTPGAPLFGGHKGNHHGSEHGKRSLLKSCISFNVDDWGTEVSCSIPPPPISLARKVGAEFIGTLMLIFSGTATAIVNQKTEGTETLIGLAASTGLAVMIVILSTGHISGAHLNPAITIAFAALKHFPWKHVPVYIGAQMVASLCSSFALKWIFDPIMGGGVTVPSCGYAQAFTLEFIISFNLMFVITAVATDTRAVGELAGIAVGATVMLNVLIAGQTTGASMNPVRTLGPAIAANNFRAIWIYLTAPILGTLCGAGIYTAVKLPNEDGDARVPSTARSFRR 295
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 16542570 16547593 + Hsped.02g13030.1 Hepe02g1303 562804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g1303 295 Gene3D Glycerol uptake facilitator protein. 61 284 IPR023271 -
Hepe02g1303 295 Pfam Major intrinsic protein 64 272 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe02g1303 295 ProSitePatterns MIP family signature. 124 132 IPR022357 -
Hepe02g1303 295 MobiDBLite consensus disorder prediction 1 33 - -
Hepe02g1303 295 PRINTS Major intrinsic protein family signature 218 240 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe02g1303 295 PRINTS Major intrinsic protein family signature 187 205 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe02g1303 295 PRINTS Major intrinsic protein family signature 67 86 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe02g1303 295 PRINTS Major intrinsic protein family signature 143 162 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe02g1303 295 PRINTS Major intrinsic protein family signature 106 130 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe02g1303 295 PRINTS Major intrinsic protein family signature 255 275 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe02g1303 295 FunFam Aquaporin NIP2-1 55 286 - -
Hepe02g1303 295 PANTHER AQUAPORIN NIP2-1 59 279 IPR034294 -
Hepe02g1303 295 SUPERFAMILY Aquaporin-like 64 281 IPR023271 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1303 Hepe-Chr2:16542570 Hepe06g1398 Hepe-Chr6:64206685 9.77e-117 dispersed
Hepe02g1303 Hepe-Chr2:16542570 Hepe06g0439 Hepe-Chr6:23712439 2.24e-73 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g1303 K09874 - csv:101207376 522.702