Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g1311 | ATGGCAAGACCTCAACAGCGCTATCGAGGAGTCCGTCAAAGGCATTGGGGCTCTTGGGTCTCTGAGATTCGTCACCCTTTACTGAAGACGAGGATATGGCTGGGCACTTTCGAAACGGCCGAAGACGCGGCGAGAGCATACGACGAAGCAGCCAGAATCATGTGTTGCCCTAAATATCTCCCAACCAATCACAATACTCCACCTCACTCCTTACCGGCGCCGCCACCGTCGAACCTTCTAACTCCGACATTGATCCACAAGTTGCAGAGATGTGGAATGGCTTCTCTCCAAATGGCCAAAAAGCAAATCCCCCAAAAAACCCACTTCGCCGACCCAACTCGTTGTCCCGCCACCAAACTCGACGGCGGCTCCGGCGGGGAGGCTCAGGAGGTCCGGCGGCTTGAAGACGACCACGTGGAACAAATGATTCAAGAGTTGCTTGATCTTGGGTCCTTTGAGTTTTGCCCTAATAATAATCATAATATTGGTTCTACAAATAATTAG | 504 | 51.59 | MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPKYLPTNHNTPPHSLPAPPPSNLLTPTLIHKLQRCGMASLQMAKKQIPQKTHFADPTRCPATKLDGGSGGEAQEVRRLEDDHVEQMIQELLDLGSFEFCPNNNHNIGSTNN | 167 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 16630495 | 16631578 | + | Hsped.02g13110.1 | Hepe02g1311 | 562812 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g1311 | 167 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 4 | 82 | IPR050913 | - | |
Hepe02g1311 | 167 | SUPERFAMILY | DNA-binding domain | 7 | 55 | IPR016177 | GO:0003677(InterPro) | |
Hepe02g1311 | 167 | SMART | rav1_2 | 7 | 73 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe02g1311 | 167 | Pfam | AP2 domain | 7 | 52 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe02g1311 | 167 | Gene3D | AP2/ERF domain | 6 | 66 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe02g1311 | 167 | ProSiteProfiles | AP2/ERF domain profile. | 7 | 67 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe02g1311 | 167 | PRINTS | Ethylene responsive element binding protein signature | 8 | 19 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe02g1311 | 167 | PRINTS | Ethylene responsive element binding protein signature | 30 | 46 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe02g1311 | 167 | FunFam | Ethylene-responsive transcription factor 2 | 6 | 64 | - | - | |
Hepe02g1311 | 167 | CDD | AP2 | 6 | 55 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe02g1311 | 167 | MobiDBLite | consensus disorder prediction | 104 | 128 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g1311 | Hepe-Chr2:16630495 | Hepe10g0227 | Hepe-Chr10:2410480 | 5.99e-50 | dispersed | |
Hepe01g1984 | Hepe-Chr1:84647565 | Hepe02g1311 | Hepe-Chr2:16630495 | 7.50e-48 | wgd | |
Hepe02g1311 | Hepe-Chr2:16630495 | Hepe03g1656 | Hepe-Chr3:73419690 | 1.05e-48 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55030 | PF00847 | AP2 | 2.70E-11 | CL0081 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g1311 | - | - | - | 0.0 |