Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g1339 | ATGGCTTTTCGCCTAATGTTTTGCTGTGGAATTGCTTCGGATCGGAAAGAAAGAGGGAAGAAACAGCAAACATGGAGGGTCTTTTCATTGAAGGAATTACACTCAGCCACAAATAATTTCAATTATGATAATAAGCTTGGAGAAGGAGGATTTGGTAGTGTTTACTGGGGTCAGCTTTGGGATGGATCACAAATTGCAGTTAAGAGGTTAAAGGTTTGGAGCAACAAAGCAGACTTGGAATTTTCCGTGGAAGTCGAGATACTCGCCCGAGTAAGGCACAAGAATCTATTGAGTTTACGCGGCTACTGTGCTGAAGGGCAAGAACGTTTGATCGTGTATGACTACATGCCCAATCTAAGTCTACTCTCCCATCTACATGGACATCACTCATCAGAATGCCAACTCGACTGGAAACGCCGAATGAAAATCGCCATTGGGTCTGCTGAGGGAATTGCCTATCTTCACAACCAAGCATCTCCACATATCATTCATCGAGACGTCAAAGCTAGTAATGTTTTGCTAGATCCAGATTTCCAAGCTCGTGTAGCCGACTTTGGATTCGCAAAACTCATCCCCGATGGTGCAACACATGTAACTACAAGAGTGAAGGGCACACTCGGATACCTCGCTCCTGAATACGCTATGTTAGGGAAGGCATCAGAGAGTTGTGACGTATACAGCTTTGGCATTCTCTTGCTCGAGCTCGCCACCGGCAAGAAACCTCTCGAGAAGTTGAGTGCAACAATGAAACGCACAATCACAGACTGGGCGCTACCAATGGTAGTTGAGAAAAAAATTGATGAACTTGCAGACCCGAAGCTAAATGGTGACTACAATGCAGACGAACTAAAGAGAGTCATCCTTGTCGCACTTTGTTGTTCCCATTCACGGCCGGAGAATCGACCCACCATGCTCGAGGTGGTAGAGCTGCTAAAAGGAGAATCAAAAGAGAAGCTAGCTAAATTAGAAGATGATGAGCTGTTCAAGAGCCATCAAGTAGCTGCAGAAACTACAGAAATATCAGCTGGTGAAGATAGCTCAGACTTCATATCAGAAGAAAAGCAAAAGGATTCAAAAGAGGAGGTGAAAGAGAGTTCAACACAAAACCCAAATGAGAATAGTAGCTGA | 1128 | 44.41 | MAFRLMFCCGIASDRKERGKKQQTWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKADLEFSVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGHHSSECQLDWKRRMKIAIGSAEGIAYLHNQASPHIIHRDVKASNVLLDPDFQARVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELATGKKPLEKLSATMKRTITDWALPMVVEKKIDELADPKLNGDYNADELKRVILVALCCSHSRPENRPTMLEVVELLKGESKEKLAKLEDDELFKSHQVAAETTEISAGEDSSDFISEEKQKDSKEEVKESSTQNPNENSS | 375 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 16921931 | 16925359 | - | Hsped.02g13390.1 | Hepe02g1339 | 562840 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g1339 | 375 | SMART | serkin_6 | 40 | 311 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe02g1339 | 375 | ProSiteProfiles | Protein kinase domain profile. | 40 | 319 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe02g1339 | 375 | CDD | STKc_IRAK | 46 | 313 | - | - | |
Hepe02g1339 | 375 | MobiDBLite | consensus disorder prediction | 334 | 375 | - | - | |
Hepe02g1339 | 375 | FunFam | PTI1-like tyrosine-protein kinase At3g15890 | 12 | 115 | - | - | |
Hepe02g1339 | 375 | SUPERFAMILY | Protein kinase-like (PK-like) | 23 | 311 | IPR011009 | - | |
Hepe02g1339 | 375 | Pfam | Protein tyrosine and serine/threonine kinase | 42 | 310 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe02g1339 | 375 | ProSitePatterns | Protein kinases ATP-binding region signature. | 46 | 68 | IPR017441 | GO:0005524(InterPro) | |
Hepe02g1339 | 375 | Gene3D | Transferase(Phosphotransferase) domain 1 | 116 | 329 | - | - | |
Hepe02g1339 | 375 | FunFam | PTI1-like tyrosine-protein kinase At3g15890 | 116 | 327 | - | - | |
Hepe02g1339 | 375 | MobiDBLite | consensus disorder prediction | 347 | 366 | - | - | |
Hepe02g1339 | 375 | PANTHER | OS01G0750732 PROTEIN | 22 | 348 | IPR050885 | - | |
Hepe02g1339 | 375 | Coils | Coil | 305 | 325 | - | - | |
Hepe02g1339 | 375 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 162 | 174 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe02g1339 | 375 | Gene3D | Phosphorylase Kinase; domain 1 | 11 | 115 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g1339 | Hepe-Chr2:16921931 | Hepe09g0512 | Hepe-Chr9:4768475 | 1.54e-130 | dispersed | |
Hepe10g0383 | Hepe-Chr10:4209839 | Hepe02g1339 | Hepe-Chr2:16921931 | 1.84e-61 | dispersed | |
Hepe10g0230 | Hepe-Chr10:2432494 | Hepe02g1339 | Hepe-Chr2:16921931 | 2.55e-71 | wgd | |
Hepe02g1339 | Hepe-Chr2:16921931 | Hepe03g1655 | Hepe-Chr3:73408316 | 5.58e-72 | wgd | |
Hepe02g1339 | Hepe-Chr2:16921931 | Hepe08g1161 | Hepe-Chr8:11834456 | 1.19e-60 | wgd | |
Hepe02g1339 | Hepe-Chr2:16921931 | Hepe09g0641 | Hepe-Chr9:5979166 | 1.82e-60 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72557 | PF00069 | Pkinase | 2.40E-44 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g1339 | - | - | - | 0.0 |