Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g1369 ATGGCGCATATTTTGCTCCATGGCACCCTTCATGTCACCATTTATGAGGTGGATAAGCTTCATTCTGGTGGTCGGAATCTCCTAAAAAAGTTGGTTGAAAACGTAGAAGAAGCAGTCGGGTTTGGCAGAGGAGTAACGAGGCTGTACGCAACCATAGATTTAGAAAAAGCCAGAGTTGGAAGAACAAGAAGACTAGAAAAAGAACATTCAAACCCAAAATGGTACGAAACTTTCCACATCTACTGCGCTCACACAGCTTCCAACATCATCTTCACTGTCAAAGACGACAATCCCATTGGAGCAACCTTAATCGGCAGAGCATATTTGCCAGTCAAAGAAGTCATACACGGCCAAGAAGTAGACAAATGGGTTCCAATCTTAGACCAACACAAGAATCCCATTCGTGGGGACCCCAAAATTCATGTCAAATTACAATTCTTCGATGTCACAAAGGATCAAAACTGGGGTTGTGGCATCAAAAGCCCCAAATTTCCAGGGGTACCCTACACTTATTTCTCTCAGAGACGTGGCTGTAAGGTAACTTTATACCAAGATGCCCATGTTCCTGATAACTTTATCCCCAAAATCCCTCTTGCTGGTGGCAAATTTTATGAGCCACAAAGGTGTTGGGAAGATGTTTTTGATGCAATTACTAATGCTAAACACTTGATTTACATTACTGGATGGTCTGTTTATACTGAGATTTCTTTGGTGAGGGATAAAAGAAGGCCAAAGCCTGGTGGAGATGTAATGCTTGGTGAATTGCTTAAGAGAAAAGCTAGTGAAGGAGTTAGAGTTCTTTTGCTTGTTTGGAATGATACAACTTCTGTGCCTGTTTTGAAGGAGGATGGGTTAATGGCTACTCATGATGAAGATACTGCTAAGTACTTTGCTAATTCTGATGTGACTTGTGTTTTGTGTCCTCGAAATCCTGATGGTGGAGCTAATGTTATTCAGGATATTGCTGTTGGGACGATGTTTACTCATCATCAGAAGATTGTTGTTGTGGATAGTGATTTGCCTAATGGGGATCCGAATAGGAGGAGGATTGTGAGTTTTGTTGGTGGGATTGATCTTTGTGATGGGAGATATGATACCCCATTTCATTCCCTTTTCAGGACTTTGGATTCTGCTCATCATGATGATTTCCATCAGCCTAACTTCGCGGGTACTTCCTTAAACAAAGGCGGTCCGAGAGAGCCATGGCACGACATCCATTCCCGCCTCGAGGGACCGGTGGCGTGGGATGTCTTGTACAACTTTGAGCAGAGATGGAAGAAGCAAGGTGGGAAGGATTTGCTTTTGAAATTAAGGGAGTTGGATGAGATCTTCATCACTCCATCGCCTGTGACGTTCCCTGATGACTTTGACAGTTGGAATGTTCAAGTTTTCAGGTCGATCGACGGCGGGGCAGCTTTCGGTTTCCCCAACTCGCCCGAAGAAGCAGCGAAAGCAGGGCTTATAAGTGGGAAGGACAATACTATTGATAGAAGCATTCAAGATTCTTACATTAATGCCATTAGACGAGCAAAGAATTTCATATACATTGAGAATCAGTATTTCCTTGGAAGCTCGTTTGAATGGAGAGGGACTGATGTGAAGCCTGAGATGATAAATGCCCTGCACCTAATCCCAAAGGAACTTTCACTTAAGATTGTGAGTAAGATTGAAGCTCGAGAGCGGTTCACCGTTTACGTTGTCGTCCCGATGTGGCCGGAAGGATTTCCGGAGGGGGGAACCGTTCAAGCAATATTAGATTGGCAAAGGAGGACAATGGAGATGATGTATAAAGATATAGTTATAGCTCTTAGAGCTAATGGCATGGAAGAGGATCCAAGAAACTATCTGACATTCTTTTGTGTAGGCAATAGGGAAGTTAAAAAGCCTGGAGAATATGAGCCATCAGAATCACCTGAAGAAAATTCTGCTTACCTTAGAGCTCAACAAGCCAGGCGCTTCATGATTTATGTTCATGCCAAGATGATGATCGTTGACGATGAATACATAATAGTGGGATCAGCAAACATCAACCAAAGATCAATGGATGGTGCAAGGGACTCAGAGATAGCCATGGGAGCTTACCAGCCATTTCATTTGTCAACTAGAGAGCCAGCAAGAGGCCAAGTTCATGGCTTTCGTTTGGCATTATGGTATGAACATTTAGGATTGCTTCATGATTCCTTCCTGTTCCCAGAAAGTATTGAGTGTGTTCGAAGAGTGAACCAACTTGCTGAAAAATATTGGGATCTTTACTCGAGTGAGACCTTTGAACATGACCTTCCTGGTCACTTGCTTCGCTACCCGATCGGCGTCTCCGCTGACGGTGAAGTTACCGAGCTTCCGGGCTTCGAGTTCTTCCCCGATACTAAGGCGCGAATTCTAGAGACGACAGTGGCAGAAGAGACCGCGGCTGGTAATGGAGAGACGACGTCGACGGCGGGGGCGGCAGTAGTGGAGAGGAGGGAAGAGAAAGCGATTTGCGGCGACTTTGGTGTTATCGGACGATGCGTCGACGGCGGCGGTGGAGAGGAGGGAGAGACGTCGACGGTGGAGAGGAGGGAGGAGACGGCGACGACGATGGAGAGAAGGGAGGAGACGGCGGCGGATTGGAGAGGAGGGGAAGGAGAAGTCGATTTGCGCTAG 2643 45.63 MAHILLHGTLHVTIYEVDKLHSGGRNLLKKLVENVEEAVGFGRGVTRLYATIDLEKARVGRTRRLEKEHSNPKWYETFHIYCAHTASNIIFTVKDDNPIGATLIGRAYLPVKEVIHGQEVDKWVPILDQHKNPIRGDPKIHVKLQFFDVTKDQNWGCGIKSPKFPGVPYTYFSQRRGCKVTLYQDAHVPDNFIPKIPLAGGKFYEPQRCWEDVFDAITNAKHLIYITGWSVYTEISLVRDKRRPKPGGDVMLGELLKRKASEGVRVLLLVWNDTTSVPVLKEDGLMATHDEDTAKYFANSDVTCVLCPRNPDGGANVIQDIAVGTMFTHHQKIVVVDSDLPNGDPNRRRIVSFVGGIDLCDGRYDTPFHSLFRTLDSAHHDDFHQPNFAGTSLNKGGPREPWHDIHSRLEGPVAWDVLYNFEQRWKKQGGKDLLLKLRELDEIFITPSPVTFPDDFDSWNVQVFRSIDGGAAFGFPNSPEEAAKAGLISGKDNTIDRSIQDSYINAIRRAKNFIYIENQYFLGSSFEWRGTDVKPEMINALHLIPKELSLKIVSKIEARERFTVYVVVPMWPEGFPEGGTVQAILDWQRRTMEMMYKDIVIALRANGMEEDPRNYLTFFCVGNREVKKPGEYEPSESPEENSAYLRAQQARRFMIYVHAKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGAYQPFHLSTREPARGQVHGFRLALWYEHLGLLHDSFLFPESIECVRRVNQLAEKYWDLYSSETFEHDLPGHLLRYPIGVSADGEVTELPGFEFFPDTKARILETTVAEETAAGNGETTSTAGAAVVERREEKAICGDFGVIGRCVDGGGGEEGETSTVERREETATTMERREETAADWRGGEGEVDLR 880
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 17394801 17406222 - Hsped.02g13690.1 Hepe02g1369 562870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g1369 880 Pfam Phospholipase D C terminal 726 794 IPR024632 -
Hepe02g1369 880 Gene3D C2 domain 6 155 IPR035892 -
Hepe02g1369 880 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 149 IPR035892 -
Hepe02g1369 880 MobiDBLite consensus disorder prediction 838 880 - -
Hepe02g1369 880 Pfam Phospholipase D Active site motif 326 363 IPR001736 GO:0003824(InterPro)
Hepe02g1369 880 Pfam Phospholipase D Active site motif 655 680 IPR001736 GO:0003824(InterPro)
Hepe02g1369 880 PIRSF PLD_plant 1 804 IPR011402 GO:0004630(InterPro)|GO:0005509(InterPro)|GO:0016020(InterPro)|GO:0046470(InterPro)
Hepe02g1369 880 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 325 363 IPR001736 GO:0003824(InterPro)
Hepe02g1369 880 FunFam Phospholipase D delta 200 443 - -
Hepe02g1369 880 FunFam Phospholipase D 466 699 - -
Hepe02g1369 880 Gene3D Endonuclease Chain A 474 696 - -
Hepe02g1369 880 PANTHER PHOSPHOLIPASE D 5 796 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Hepe02g1369 880 SUPERFAMILY Phospholipase D/nuclease 150 435 - -
Hepe02g1369 880 SUPERFAMILY Phospholipase D/nuclease 499 737 - -
Hepe02g1369 880 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 653 680 IPR001736 GO:0003824(InterPro)
Hepe02g1369 880 ProSiteProfiles C2 domain profile. 1 124 IPR000008 -
Hepe02g1369 880 Pfam C2 domain 10 125 IPR000008 -
Hepe02g1369 880 MobiDBLite consensus disorder prediction 845 880 - -
Hepe02g1369 880 Gene3D Endonuclease Chain A 200 441 - -
Hepe02g1369 880 CDD C2_plant_PLD 2 147 - -
Hepe02g1369 880 SMART pld_4 653 680 IPR001736 GO:0003824(InterPro)
Hepe02g1369 880 SMART pld_4 325 363 IPR001736 GO:0003824(InterPro)
Hepe02g1369 880 SMART C2_3c 9 123 IPR000008 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1369 Hepe-Chr2:17394801 Hepe03g0480 Hepe-Chr3:7422899 1.78e-237 dispersed
Hepe09g1127 Hepe-Chr9:12945037 Hepe02g1369 Hepe-Chr2:17394801 2.16e-34 transposed
Hepe10g0254 Hepe-Chr10:2651338 Hepe02g1369 Hepe-Chr2:17394801 0.0 wgd
Hepe02g1369 Hepe-Chr2:17394801 Hepe03g1618 Hepe-Chr3:73083410 0.0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g1369 K01115 - csv:101215246 1521.52