Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g1370 | ATGGCGAAACAAAGGAAGTTCAGAGGAGTGAGGCAACGCCTGTGGGGCTCTTGGGTCTCTGAGATTCGTCACCCTCTCCTAAAAAAAAGGATTTGGTTGGGGACGTTTGATACCGCTGAAGACGCAGCCCGAGCCTACGATGAGGCCGCCGTTCTCATGAGTGGTCGAACCGCCAAGACCAACTTTCCAGTGAAAGCTACACTCCGAAGCGAAGCTAGAAATTTTCGTAAGTCTCCATTTCTAGACAAGACCAACTCAAGCACAGCATCGTCACCGTTATCAACAATTCTAAATGCTAAACTTCTCAAATGTTGCAAATCTCTACATCCTTCTCTAACTTGTCTCCGTCTCGACACCGAGAGTTGTCGCATCGGCGTCTGGCAGAGGCGTGCGGGACATCGTAGAGTGGCCGACTCGAACTGGGTGATGATGGTCGAGCTTGAGAAGAACGACGACGGATTCCGAGTGACGGACAAGTTGCCGGAAAAGGATGTGGAAGAGGTGAAATTATCAAGTACCAGAAAAAGTTTAGATGATGAGGAAAGAGCTGCTTTGCAGATGATTGAAGAACTTTTGAATAAGATATGA | 588 | 48.13 | MAKQRKFRGVRQRLWGSWVSEIRHPLLKKRIWLGTFDTAEDAARAYDEAAVLMSGRTAKTNFPVKATLRSEARNFRKSPFLDKTNSSTASSPLSTILNAKLLKCCKSLHPSLTCLRLDTESCRIGVWQRRAGHRRVADSNWVMMVELEKNDDGFRVTDKLPEKDVEEVKLSSTRKSLDDEERAALQMIEELLNKI | 195 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 17426347 | 17427462 | + | Hsped.02g13700.1 | Hepe02g1370 | 562871 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g1370 | 195 | FunFam | Ethylene-responsive transcription factor 2 | 5 | 65 | - | - | |
Hepe02g1370 | 195 | PRINTS | Ethylene responsive element binding protein signature | 29 | 45 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe02g1370 | 195 | PRINTS | Ethylene responsive element binding protein signature | 7 | 18 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe02g1370 | 195 | Gene3D | AP2/ERF domain | 5 | 66 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe02g1370 | 195 | SUPERFAMILY | DNA-binding domain | 6 | 64 | IPR016177 | GO:0003677(InterPro) | |
Hepe02g1370 | 195 | ProSiteProfiles | AP2/ERF domain profile. | 6 | 63 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe02g1370 | 195 | CDD | AP2 | 6 | 64 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe02g1370 | 195 | SMART | rav1_2 | 6 | 69 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe02g1370 | 195 | Pfam | AP2 domain | 6 | 50 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe02g1370 | 195 | Coils | Coil | 174 | 194 | - | - | |
Hepe02g1370 | 195 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 3 | 136 | IPR050913 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe01g2025 | Hepe-Chr1:84978406 | Hepe02g1370 | Hepe-Chr2:17426347 | 1.60e-65 | dispersed | |
Hepe02g1370 | Hepe-Chr2:17426347 | Hepe10g0226 | Hepe-Chr10:2400040 | 9.18e-31 | dispersed | |
Hepe02g1370 | Hepe-Chr2:17426347 | Hepe08g2535 | Hepe-Chr8:66945677 | 4.83e-55 | wgd | |
Hepe02g1370 | Hepe-Chr2:17426347 | Hepe09g0678 | Hepe-Chr9:6424384 | 2.17e-57 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55033 | PF00847 | AP2 | 4.40E-12 | CL0081 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g1370 | - | - | - | 0.0 |