Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g1390 ATGGGGAATCTCAGGGCTCCATTTAGGGGTATTGTGGATGATATCAGAGGAAGAGCCGCCTGTTACAAGCAAGATTGGATTGATGGTCGACTTTCAGGAATCGGAATTTTGGCCCCAACTGCCTACATTTTTTTTGCTTCTGCACTTCCTGTCATTGCTTTTGGTGAGCAACTGAGCCGAGATACAGAGGGAAGCTTGAGCACAGTAGAATCTTTGGCTTCCACAGCCATTTGTGGCATCATTCATTCAATTCTTGGTGGACAACCTCTCCTAGTTGTAGGGGTTGCAGAACCTACAATTATTATGTATATCTATTTGTACAATTTTTGCAAGGAAAGGCAAGAATTAGGGAGAGATCTCTTCTTGGCTTGGGCAGGATGGGTTTGTGTCTGGACAGCCCTCTTGCTGTTTCTTCTTGCTATATTCAATGCTTCCAGTCTAATCAGCAAATTTACAAGGATTGCAGGGGAACTTTTTGGCATGTTAATCTCTGTTTTGTTCATTCAAGAAGCTATTAAGGGAGTGGTGAGCGAATTTGAAGTTCCAAAGGCCGAGAATCCAAGTTTAGAGAAGTATCAATTTCATTGGCTTTACACAAATGGATTACTGGGAATCATATTTACTTTTGGCCTTCTCTATACTGCTTTGAAGAGCAGAAAGGCAAGATCATGGTTGTATGGCACAGGCTGGCTAAGGAGTTTCATTGCAGACTATGGAGTTCCTCTGATGGTTTTAGTATGGACTGCACTATCATTTAGTGTTGCAAGCAAAGTCCCCTCTGGAGTTCCTAGAAGACTTCAAAGTCCTCTCGCATGGCAATCGACTTCTCTGCACCACTGGACCGTTGTCGAGGACATGGGGAAGATACCTCCTGCATACATCTTTGCGGCCTTTATTCCTGCTGTGATGATTGCAGGACTTTATTTTTTTGATCATAGTGTTGCTTCTCAGATGGCACAACAAAAGGAGTTTAATCTCAAGAACCCTTCTGCTTACCACTATGACATCCTGTTGCTGGGATTTATGACGTTGCTTTGCGGGTTAATCGGGATTCCTCCTTCGAATGGGGTTTTGCCACAGTCCCCCATGCACACCAAGTGTCTTGCAACTCTCAGGAGGCGCTTTATGCGAAGGAAGATGGTGGAAAGTGCAAAAGAAAGCATAAAAAGGAAAGCTAGTGATTCCGAAATCTATGGTCAAATGCAAGCTGTGTTCTTAGAAATGGAGAGCAGCCCAGATACGACATCGGTAGTCGAAGAGCTGGAAGATTTGAAGGATGCAGTCATGAAGGGTGAAAGTAAGGATGCAAATGCGAAGGTTACATTTGACCCGGAGAGGCATATTGATGCTTATCTTCCTGTCCGAGTAAACGAGCAAAGATTGAGCAATCTGCTGCAATCACTTCTGGTAGCAGCATCAGTATTTGCTTTACCAGCCATAAAGAAGATACCAACATCAGTTCTCTGGGGATACTTTGCCTACATGGCCATTGACAGTCTACCTGGAAACCAATTCTGGGAAAGGATTTTACTTCTCTTCGTAATGCCAAGCCGACAATACAAGGTCCTAGAAGGCTTTCATGCTTCCTTTGTGGAGTCTGTGCCATTCAAATACATAGCCGCATTCACTCTATTTCAATTTGTATATCTCCTCATTTGTTTTGGAGTGACATGGATCCCTATAGCCGGAGTTTTGTTTCCTTTGCCTTTCTTCCTTCTCATCGGCATAAGACATCACATCCTTCCCAAGCTACTCCAACCTCGTTATTTACAGGAGCTCGACGCAGCTGAGTATGAAGAAATAACCGGTACCCCGGTTCTCTCGCTTAGCGTTTCGATCAAGGAAAAGGATATCACTCAACTAGTTACTAATGAAGATGAAGTTGAAATATGTGATGCTGAAATACTAGATGAGTTGACAACACATAGAGGGGAGTTGAAGCTTAGAACTATAAGCTTCAGTGACGATCGACACGGTCAGATCTATCCTGACCAAGGCATTGGCATTTCAAATACTAAAAGTTGA 2025 43.41 MGNLRAPFRGIVDDIRGRAACYKQDWIDGRLSGIGILAPTAYIFFASALPVIAFGEQLSRDTEGSLSTVESLASTAICGIIHSILGGQPLLVVGVAEPTIIMYIYLYNFCKERQELGRDLFLAWAGWVCVWTALLLFLLAIFNASSLISKFTRIAGELFGMLISVLFIQEAIKGVVSEFEVPKAENPSLEKYQFHWLYTNGLLGIIFTFGLLYTALKSRKARSWLYGTGWLRSFIADYGVPLMVLVWTALSFSVASKVPSGVPRRLQSPLAWQSTSLHHWTVVEDMGKIPPAYIFAAFIPAVMIAGLYFFDHSVASQMAQQKEFNLKNPSAYHYDILLLGFMTLLCGLIGIPPSNGVLPQSPMHTKCLATLRRRFMRRKMVESAKESIKRKASDSEIYGQMQAVFLEMESSPDTTSVVEELEDLKDAVMKGESKDANAKVTFDPERHIDAYLPVRVNEQRLSNLLQSLLVAASVFALPAIKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVMPSRQYKVLEGFHASFVESVPFKYIAAFTLFQFVYLLICFGVTWIPIAGVLFPLPFFLLIGIRHHILPKLLQPRYLQELDAAEYEEITGTPVLSLSVSIKEKDITQLVTNEDEVEICDAEILDELTTHRGELKLRTISFSDDRHGQIYPDQGIGISNTKS 674
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 17587505 17593080 - Hsped.02g13900.1 Hepe02g1390 562891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g1390 674 Gene3D Helical hairpin bin 18 60 - -
Hepe02g1390 674 PANTHER ANION EXCHANGE PROTEIN 5 643 IPR003020 GO:0005452(InterPro)|GO:0005886(PANTHER)|GO:0006820(InterPro)|GO:0016020(InterPro)|GO:0022857(PANTHER)|GO:0050801(PANTHER)|GO:0055085(PANTHER)
Hepe02g1390 674 Pfam HCO3- transporter integral membrane domain 7 184 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Hepe02g1390 674 Pfam HCO3- transporter integral membrane domain 454 596 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Hepe02g1390 674 Pfam HCO3- transporter integral membrane domain 201 373 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1172 Hepe-Chr2:14587240 Hepe02g1390 Hepe-Chr2:17587505 3.67e-273 transposed
Hepe07g2224 Hepe-Chr7:66604822 Hepe02g1390 Hepe-Chr2:17587505 3.97e-271 transposed
Hepe10g0274 Hepe-Chr10:2874624 Hepe02g1390 Hepe-Chr2:17587505 0.0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g1390 K24194 - csv:101210964 1176.0