Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g1414 ATGGATTTCTGGCCGGAATTTCTCGCTAACAGTTGGGGAAAAGAGTTTATCGCCGGCGGAGTCGGCGGCGTCGCCGGTGTCGTCTCCGGCTACCCACTCGACACCCTCCGCATACGACAACAACACTCCACCTCCGGCTCCGCCATCAGCGTTCTCCGTAACATCATGTCCAACGGCGGCCCCGCCGCCCTCTACAGAGGAATGGGTGCTCCACTCGCTTCCGTCACTTTTCAGAACGCCATTGTTTTCCAGACCAACGCCGTCCTCTGCAGAGCATTCGATCCGGCGACGACGGACAACCGTCCGCCGTCGTACAAGGCGGTGGCATTAGGCGGATTCGGCACCGGAGGATTACAGAGCCTAATTCTAACACCGGTGGAGCTCGTCAAAATCCGTCTTCAATTACAAGATTTAGGAAGCAATTCAAATTCATCAACCCACCACTCAGATCTGAGATCGTCTCGCCTCGGGCCGATGCAGGTTGCGAAGAACATTTTCAAAACCGAAGGCTACAGAGGATTATACAGAGGCTTAACAATCACAATGCTCAGAGACGCTCCTTCCCACTGTTTTTACTTTCTAACTTACGAATTCATGAGAGAAAAGCTTCATCCCGGCTGCAGAAACTCCGGGCAAGAGACCTTGAGGACGATGCTCGTCGCCGGTGGTCTCGCCGGCGTCGCCAGTTGGGTCTGTTGTTACCCACTCGACGTGGTGAAAACCAGACTTCAAGCTCAGTCCAAATTCGCCTTTCAAAAGTACAGTGGAATCGCGGATTGTTTCTCCAAGAGCGTTAAGGAAGAAGGGTACAGAGTTTTGTGGCGTGGATTGGGAACCGCCATTGCTAGAGCTTTTGTGGTTAATGGAGCAATTTTCTCTGCTTATGAACTCAGTTTGAGGTGTCTGTTCAGCAATGGAGGATTTCATGCTGAAAATACGATTTGA 945 51.96 MDFWPEFLANSWGKEFIAGGVGGVAGVVSGYPLDTLRIRQQHSTSGSAISVLRNIMSNGGPAALYRGMGAPLASVTFQNAIVFQTNAVLCRAFDPATTDNRPPSYKAVALGGFGTGGLQSLILTPVELVKIRLQLQDLGSNSNSSTHHSDLRSSRLGPMQVAKNIFKTEGYRGLYRGLTITMLRDAPSHCFYFLTYEFMREKLHPGCRNSGQETLRTMLVAGGLAGVASWVCCYPLDVVKTRLQAQSKFAFQKYSGIADCFSKSVKEEGYRVLWRGLGTAIARAFVVNGAIFSAYELSLRCLFSNGGFHAENTI 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 18029169 18030921 + Hsped.02g14140.1 Hepe02g1414 562915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g1414 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 92 IPR018108 -
Hepe02g1414 314 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 9 302 IPR050567 GO:0006810(PANTHER)|GO:0022857(PANTHER)
Hepe02g1414 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 202 IPR018108 -
Hepe02g1414 314 PRINTS Mitochondrial carrier protein signature 175 193 IPR002067 GO:0055085(InterPro)
Hepe02g1414 314 PRINTS Mitochondrial carrier protein signature 222 244 IPR002067 GO:0055085(InterPro)
Hepe02g1414 314 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085(InterPro)
Hepe02g1414 314 PRINTS Mitochondrial carrier protein signature 118 136 IPR002067 GO:0055085(InterPro)
Hepe02g1414 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 301 IPR018108 -
Hepe02g1414 314 Gene3D Mitochondrial carrier domain 12 306 IPR023395 -
Hepe02g1414 314 Pfam Mitochondrial carrier protein 109 203 IPR018108 -
Hepe02g1414 314 Pfam Mitochondrial carrier protein 11 87 IPR018108 -
Hepe02g1414 314 Pfam Mitochondrial carrier protein 216 303 IPR018108 -
Hepe02g1414 314 SUPERFAMILY Mitochondrial carrier 11 296 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1414 Hepe-Chr2:18029169 Hepe06g1025 Hepe-Chr6:58210943 1.41e-46 dispersed
Hepe05g0070 Hepe-Chr5:744545 Hepe02g1414 Hepe-Chr2:18029169 6.80e-27 transposed
Hepe02g1414 Hepe-Chr2:18029169 Hepe03g1558 Hepe-Chr3:72376520 8.13e-159 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g1414 K15109 - csv:101222749 575.089