Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g1422 | ATGGATGAGAGTTCAGGATCAAACAATGGAAACCACAGTGTTTCTTTGAATATCAAAGATGATTCTACAGCGGATTGTATCCCTGTACTTTTCGTTCAGAAGTTGATTGCAGAGGTGATGGGGACATATTTCTTGATATTTGCAGGGGAAGCTTCAGTAGTGGTGAATTTGAACAAAGATGGAGTCATCACTTTCCCAGGGATTTCAATTGTTTGGGGTTTGGTTGTAATGGTGATGATCTATTCTGTTGGCCATATATCTGGTGCTCATTTTAACCCTTCTGTCACCATAGCCTTTGCCATTACCAGGAGATTTCCATGGAAAGAGGTGCCAGCATATTTGGTAGCTCAAATTATTGGATCAACATTAGCAAGTGGGACACTTAGGCTAATATTTAATGGAACACAAGACCACTTTCCAGGAACTCTCCCAAGTGACTCATATCTGCAGACCTTTGTGATTGAATTCATAATCACATTTTACCTCATGTTTGTGGTATCTGGTGTTGCCACTGACAATAGAGCCATTGGTGAGCTTGCTGGACTCGCCGTGGGTGCTACTGTACTTCTCAATGTGATGATTGCAGGGCCAATTACAGGAGCATCCATGAATCCAGCCAGAAGCTTGGGACCTGCTATAGTATTTAAACAGTTCAAAGGGTTATGGATCTACATGACAGCACCTATTCTAGGAGCAACTGCAGGTGCGTTAGTGTATAATACCATCAGGTTCACAGATAAACCTCTACGAGAGATCACGAAAAGCGCCTCGTTCCTCAAAAGTCGTCAAGGCACCCCATGA | 801 | 42.82 | MDESSGSNNGNHSVSLNIKDDSTADCIPVLFVQKLIAEVMGTYFLIFAGEASVVVNLNKDGVITFPGISIVWGLVVMVMIYSVGHISGAHFNPSVTIAFAITRRFPWKEVPAYLVAQIIGSTLASGTLRLIFNGTQDHFPGTLPSDSYLQTFVIEFIITFYLMFVVSGVATDNRAIGELAGLAVGATVLLNVMIAGPITGASMNPARSLGPAIVFKQFKGLWIYMTAPILGATAGALVYNTIRFTDKPLREITKSASFLKSRQGTP | 266 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 18086203 | 18087488 | - | Hsped.02g14220.1 | Hepe02g1422 | 562923 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g1422 | 266 | SUPERFAMILY | Aquaporin-like | 29 | 253 | IPR023271 | - | |
Hepe02g1422 | 266 | NCBIfam | MIP family channel protein | 37 | 239 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe02g1422 | 266 | ProSitePatterns | MIP family signature. | 90 | 98 | IPR022357 | - | |
Hepe02g1422 | 266 | PANTHER | AQUAPORIN NIP2-1 | 23 | 247 | IPR034294 | - | |
Hepe02g1422 | 266 | CDD | MIP | 33 | 242 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe02g1422 | 266 | Gene3D | Glycerol uptake facilitator protein. | 8 | 254 | IPR023271 | - | |
Hepe02g1422 | 266 | Pfam | Major intrinsic protein | 30 | 239 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe02g1422 | 266 | PRINTS | Major intrinsic protein family signature | 109 | 128 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe02g1422 | 266 | PRINTS | Major intrinsic protein family signature | 222 | 242 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe02g1422 | 266 | PRINTS | Major intrinsic protein family signature | 154 | 172 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe02g1422 | 266 | PRINTS | Major intrinsic protein family signature | 72 | 96 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe02g1422 | 266 | PRINTS | Major intrinsic protein family signature | 33 | 52 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe02g1422 | 266 | PRINTS | Major intrinsic protein family signature | 185 | 207 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g1422 | Hepe-Chr2:18086203 | Hepe06g0442 | Hepe-Chr6:23783290 | 8.94e-184 | dispersed | |
Hepe02g1421 | Hepe-Chr2:18073403 | Hepe02g1422 | Hepe-Chr2:18086203 | 3.25e-186 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g1422 | K09874 | - | csv:101219297 | 425.631 |