Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g1423 ATGTCCAACAATAATCGCCTCGCTTTTACTAAAGACTTCTTCTCCTCTCCTGCTCTTTCTCTTACTCTCGCGGGGATTTTTCGCCGGGGTGAGGTGAGGGAGAAGGGAGATGTCGAGATGGAGGAGGTGGACGATGGTAGCGGAGTGCGGCGGGATGATGCGGCGGAGGTTAGTAGTGAGAATTCGGGACCGGTGAGGTCGAGATCCGACGACGATTTTGACGGCGGAGGAGTACATGAAGAGAATGAAGATGGGGATCATGGATGTCATGTAAAGAGAAGGAAGAAATATCATCGGCATACCACCGAGCAGATTAGAGAAATGGAGGCGCTATTTAAAGAGTCGCCACACCCAGATGAGAAGCAAAGGCAGCAGCTTAGCAAGAGATTAGGACTTTCACCAAGGCAGGTCAAGTTTTGGTTCCAAAATCGGCGAACCCAAATCAAAGCTATTCAAGAACGCCATGAAAACACATTGTTAAAAGTTGAAATGGAGAAACTTCGAGAAGAAAATAAAGCCATGAGAGAAATTACCAAGAAAAAAGCTGGTTGTCCAAGCTGTGGCATTGTTGACGCTGGTGAAGACCACGCTGCATTGACAACCACAGAGCAATTGCGTATTAAGAATGCTAAACTCAAAGTCGAGGTTGAAAAACTACGAGCCGCATTGGGAAAACAACCACAAGCAGTGATGTCTCCTTCATACTCATCTGGAAACGACCAAGATCAGACGAATCAAAGCTGCTTAGATTTTTACACAGGAATTTTCGGGCTTGAAAAGTCAAAGATCATGGAGAAGGTTCACCAAGCTCTCGAAGAGCTCAAAACAATGGCTGCCACCAGCGAGCCACTTTGGGTTCGTAGCGTCGAGACCGGAAGAGAGATTTTAAACTACGACGAGTATTTGAAAACGTTTCATCTCAACAATAATTCAAACCGCTGTTGGCTCAAAACACACATTGAGGCCTCTCGAGACACGACCGTTGTCTTCATGGAGCCCTCCAGGTTGGTTCAAAGCTTCATGGACGAGAATCAATGGAAGGAGATGTTTCCTTTCATGATCTCGAAAGCAGCTACCGTTGATGTTATATGTAATGGAGAAGTTGCCAATTGGAATGGCGCAGTGCAATTGATGTTTGCAGAGGTGCAAATGCTTACACCATTGGTGCCTACTAGAGAAATGTATTTCATACGCCATTGCAAGCAGCTCGACGCTGAACAGTGGGCGATCGTCGATGTTTCGATCGAAAATGTTGAAGATAATAATATCGATGCATCGTTGGTGAAATACAGAAAACGTCCTTCTGGTTGCATCATTAAGGATGAATCTAATGGCCATTGCAAGGTAACAATTGTGGAGCATTTGGAGTGTGAAAAAAACAAAGTTCACAACTTGTACCGCAGCATAGTCAACAATGGCACTGCCTTTGGAGCAAGACATTGGATGGCAACACTTCAACTCCAATGCGAACGCCTTGCTTTCTTCATGGCCACCAATATTCCCATGAAAGACTCAACTGGAGTTGCAACGCTGGCGGGAAGAAAAAGCACATTAAAGTTGGCACAGAGAATGACTTCAAGCTTCTCCCAAGCAGTTGCAGCTTCAAGTTATCAAACATGGACCAAAGTTGTGGGGAAATCAGGGGAAGACATTAGGGTTTGTTCCAGGAAGAATCTTAGTGACCCTGGTGAACCCATTGGTGTTATTTTGTGTGCAGTTTCTTCTCTATGGTTGCCTCTTTCTCCCCATGCTCTCTTCTATTTCTTGAGAGACGAATCTCGCAGAAATGAGTGGGACGCTATGTTTGGTGGAGATAAAGTTCAGTCGATTGCAAATTTGGCTAAAGGACAGGATCGAGGCAACTCAGTTACCATTCAAACAATTGGATCAAAAGAGAACAGTAGCAGCAGCAGCATGTGGATCCTCCAAGACAGCTCCACAAACTCATCGGAATCCATGGTGGTGTACTCCGGAGTAGACGTTTCCGGCATGCAGTCGGTGATGACAGGGTGTGATTCCGGCAGCCTGACCATCCTCCCGTCGGGCTTTTCAATTCTCCCCGACGGCGCTGACTCCAGGCCGCCTCTCCTCATCACTCGCCGGAAAGACCACAAATCCGCTGACAGTCACGGCGGCTCTCTGCTCACCGCCGCCGTCCAAATCCTCACCGACGCCTCTCCCTCTGCAAAACCCACCGTGGAGTCGGTTGAGTACGTTAAAAGCATAATTTCTTGTACGCTAAAAAATATCAGAACCAGCTTGTGCTGTGAGGATGATTGA 2280 46.8 MSNNNRLAFTKDFFSSPALSLTLAGIFRRGEVREKGDVEMEEVDDGSGVRRDDAAEVSSENSGPVRSRSDDDFDGGGVHEENEDGDHGCHVKRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKVEMEKLREENKAMREITKKKAGCPSCGIVDAGEDHAALTTTEQLRIKNAKLKVEVEKLRAALGKQPQAVMSPSYSSGNDQDQTNQSCLDFYTGIFGLEKSKIMEKVHQALEELKTMAATSEPLWVRSVETGREILNYDEYLKTFHLNNNSNRCWLKTHIEASRDTTVVFMEPSRLVQSFMDENQWKEMFPFMISKAATVDVICNGEVANWNGAVQLMFAEVQMLTPLVPTREMYFIRHCKQLDAEQWAIVDVSIENVEDNNIDASLVKYRKRPSGCIIKDESNGHCKVTIVEHLECEKNKVHNLYRSIVNNGTAFGARHWMATLQLQCERLAFFMATNIPMKDSTGVATLAGRKSTLKLAQRMTSSFSQAVAASSYQTWTKVVGKSGEDIRVCSRKNLSDPGEPIGVILCAVSSLWLPLSPHALFYFLRDESRRNEWDAMFGGDKVQSIANLAKGQDRGNSVTIQTIGSKENSSSSSMWILQDSSTNSSESMVVYSGVDVSGMQSVMTGCDSGSLTILPSGFSILPDGADSRPPLLITRRKDHKSADSHGGSLLTAAVQILTDASPSAKPTVESVEYVKSIISCTLKNIRTSLCCEDD 759
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 18101679 18108005 - Hsped.02g14230.1 Hepe02g1423 562924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g1423 759 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 83 756 IPR042160 -
Hepe02g1423 759 CDD homeodomain 94 149 IPR001356 GO:0003677(InterPro)
Hepe02g1423 759 MobiDBLite consensus disorder prediction 34 57 - -
Hepe02g1423 759 Pfam Homeodomain 94 149 IPR001356 GO:0003677(InterPro)
Hepe02g1423 759 ProSiteProfiles 'Homeobox' domain profile. 91 151 IPR001356 GO:0003677(InterPro)
Hepe02g1423 759 SMART START_1 265 491 IPR002913 GO:0008289(InterPro)
Hepe02g1423 759 CDD START_ArGLABRA2_like 260 490 - -
Hepe02g1423 759 MobiDBLite consensus disorder prediction 65 90 - -
Hepe02g1423 759 MobiDBLite consensus disorder prediction 34 99 - -
Hepe02g1423 759 FunFam Homeobox-leucine zipper protein GLABRA 2 265 490 - -
Hepe02g1423 759 Gene3D - 80 163 - -
Hepe02g1423 759 SUPERFAMILY Bet v1-like 258 492 - -
Hepe02g1423 759 Coils Coil 202 222 - -
Hepe02g1423 759 Coils Coil 150 180 - -
Hepe02g1423 759 ProSiteProfiles START domain profile. 256 494 IPR002913 GO:0008289(InterPro)
Hepe02g1423 759 SMART HOX_1 93 155 IPR001356 GO:0003677(InterPro)
Hepe02g1423 759 SUPERFAMILY Homeodomain-like 81 152 IPR009057 -
Hepe02g1423 759 ProSitePatterns 'Homeobox' domain signature. 126 149 IPR017970 GO:0000981(InterPro)|GO:0006355(InterPro)
Hepe02g1423 759 SUPERFAMILY Bet v1-like 534 721 - -
Hepe02g1423 759 Gene3D - 265 491 IPR023393 -
Hepe02g1423 759 Pfam START domain 269 491 IPR002913 GO:0008289(InterPro)
Hepe02g1423 759 FunFam Homeobox-leucine zipper protein HDG1 79 167 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1423 Hepe-Chr2:18101679 Hepe03g0511 Hepe-Chr3:8847067 6.75e-169 dispersed
Hepe02g1423 Hepe-Chr2:18101679 Hepe03g1543 Hepe-Chr3:72277456 9.58e-259 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55036 PF01852 START 2.00E-54 CL0209 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g1423 K09338 - csv:101221341 1279.62