Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g1423 | ATGTCCAACAATAATCGCCTCGCTTTTACTAAAGACTTCTTCTCCTCTCCTGCTCTTTCTCTTACTCTCGCGGGGATTTTTCGCCGGGGTGAGGTGAGGGAGAAGGGAGATGTCGAGATGGAGGAGGTGGACGATGGTAGCGGAGTGCGGCGGGATGATGCGGCGGAGGTTAGTAGTGAGAATTCGGGACCGGTGAGGTCGAGATCCGACGACGATTTTGACGGCGGAGGAGTACATGAAGAGAATGAAGATGGGGATCATGGATGTCATGTAAAGAGAAGGAAGAAATATCATCGGCATACCACCGAGCAGATTAGAGAAATGGAGGCGCTATTTAAAGAGTCGCCACACCCAGATGAGAAGCAAAGGCAGCAGCTTAGCAAGAGATTAGGACTTTCACCAAGGCAGGTCAAGTTTTGGTTCCAAAATCGGCGAACCCAAATCAAAGCTATTCAAGAACGCCATGAAAACACATTGTTAAAAGTTGAAATGGAGAAACTTCGAGAAGAAAATAAAGCCATGAGAGAAATTACCAAGAAAAAAGCTGGTTGTCCAAGCTGTGGCATTGTTGACGCTGGTGAAGACCACGCTGCATTGACAACCACAGAGCAATTGCGTATTAAGAATGCTAAACTCAAAGTCGAGGTTGAAAAACTACGAGCCGCATTGGGAAAACAACCACAAGCAGTGATGTCTCCTTCATACTCATCTGGAAACGACCAAGATCAGACGAATCAAAGCTGCTTAGATTTTTACACAGGAATTTTCGGGCTTGAAAAGTCAAAGATCATGGAGAAGGTTCACCAAGCTCTCGAAGAGCTCAAAACAATGGCTGCCACCAGCGAGCCACTTTGGGTTCGTAGCGTCGAGACCGGAAGAGAGATTTTAAACTACGACGAGTATTTGAAAACGTTTCATCTCAACAATAATTCAAACCGCTGTTGGCTCAAAACACACATTGAGGCCTCTCGAGACACGACCGTTGTCTTCATGGAGCCCTCCAGGTTGGTTCAAAGCTTCATGGACGAGAATCAATGGAAGGAGATGTTTCCTTTCATGATCTCGAAAGCAGCTACCGTTGATGTTATATGTAATGGAGAAGTTGCCAATTGGAATGGCGCAGTGCAATTGATGTTTGCAGAGGTGCAAATGCTTACACCATTGGTGCCTACTAGAGAAATGTATTTCATACGCCATTGCAAGCAGCTCGACGCTGAACAGTGGGCGATCGTCGATGTTTCGATCGAAAATGTTGAAGATAATAATATCGATGCATCGTTGGTGAAATACAGAAAACGTCCTTCTGGTTGCATCATTAAGGATGAATCTAATGGCCATTGCAAGGTAACAATTGTGGAGCATTTGGAGTGTGAAAAAAACAAAGTTCACAACTTGTACCGCAGCATAGTCAACAATGGCACTGCCTTTGGAGCAAGACATTGGATGGCAACACTTCAACTCCAATGCGAACGCCTTGCTTTCTTCATGGCCACCAATATTCCCATGAAAGACTCAACTGGAGTTGCAACGCTGGCGGGAAGAAAAAGCACATTAAAGTTGGCACAGAGAATGACTTCAAGCTTCTCCCAAGCAGTTGCAGCTTCAAGTTATCAAACATGGACCAAAGTTGTGGGGAAATCAGGGGAAGACATTAGGGTTTGTTCCAGGAAGAATCTTAGTGACCCTGGTGAACCCATTGGTGTTATTTTGTGTGCAGTTTCTTCTCTATGGTTGCCTCTTTCTCCCCATGCTCTCTTCTATTTCTTGAGAGACGAATCTCGCAGAAATGAGTGGGACGCTATGTTTGGTGGAGATAAAGTTCAGTCGATTGCAAATTTGGCTAAAGGACAGGATCGAGGCAACTCAGTTACCATTCAAACAATTGGATCAAAAGAGAACAGTAGCAGCAGCAGCATGTGGATCCTCCAAGACAGCTCCACAAACTCATCGGAATCCATGGTGGTGTACTCCGGAGTAGACGTTTCCGGCATGCAGTCGGTGATGACAGGGTGTGATTCCGGCAGCCTGACCATCCTCCCGTCGGGCTTTTCAATTCTCCCCGACGGCGCTGACTCCAGGCCGCCTCTCCTCATCACTCGCCGGAAAGACCACAAATCCGCTGACAGTCACGGCGGCTCTCTGCTCACCGCCGCCGTCCAAATCCTCACCGACGCCTCTCCCTCTGCAAAACCCACCGTGGAGTCGGTTGAGTACGTTAAAAGCATAATTTCTTGTACGCTAAAAAATATCAGAACCAGCTTGTGCTGTGAGGATGATTGA | 2280 | 46.8 | MSNNNRLAFTKDFFSSPALSLTLAGIFRRGEVREKGDVEMEEVDDGSGVRRDDAAEVSSENSGPVRSRSDDDFDGGGVHEENEDGDHGCHVKRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKVEMEKLREENKAMREITKKKAGCPSCGIVDAGEDHAALTTTEQLRIKNAKLKVEVEKLRAALGKQPQAVMSPSYSSGNDQDQTNQSCLDFYTGIFGLEKSKIMEKVHQALEELKTMAATSEPLWVRSVETGREILNYDEYLKTFHLNNNSNRCWLKTHIEASRDTTVVFMEPSRLVQSFMDENQWKEMFPFMISKAATVDVICNGEVANWNGAVQLMFAEVQMLTPLVPTREMYFIRHCKQLDAEQWAIVDVSIENVEDNNIDASLVKYRKRPSGCIIKDESNGHCKVTIVEHLECEKNKVHNLYRSIVNNGTAFGARHWMATLQLQCERLAFFMATNIPMKDSTGVATLAGRKSTLKLAQRMTSSFSQAVAASSYQTWTKVVGKSGEDIRVCSRKNLSDPGEPIGVILCAVSSLWLPLSPHALFYFLRDESRRNEWDAMFGGDKVQSIANLAKGQDRGNSVTIQTIGSKENSSSSSMWILQDSSTNSSESMVVYSGVDVSGMQSVMTGCDSGSLTILPSGFSILPDGADSRPPLLITRRKDHKSADSHGGSLLTAAVQILTDASPSAKPTVESVEYVKSIISCTLKNIRTSLCCEDD | 759 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 18101679 | 18108005 | - | Hsped.02g14230.1 | Hepe02g1423 | 562924 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g1423 | 759 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 | 83 | 756 | IPR042160 | - | |
Hepe02g1423 | 759 | CDD | homeodomain | 94 | 149 | IPR001356 | GO:0003677(InterPro) | |
Hepe02g1423 | 759 | MobiDBLite | consensus disorder prediction | 34 | 57 | - | - | |
Hepe02g1423 | 759 | Pfam | Homeodomain | 94 | 149 | IPR001356 | GO:0003677(InterPro) | |
Hepe02g1423 | 759 | ProSiteProfiles | 'Homeobox' domain profile. | 91 | 151 | IPR001356 | GO:0003677(InterPro) | |
Hepe02g1423 | 759 | SMART | START_1 | 265 | 491 | IPR002913 | GO:0008289(InterPro) | |
Hepe02g1423 | 759 | CDD | START_ArGLABRA2_like | 260 | 490 | - | - | |
Hepe02g1423 | 759 | MobiDBLite | consensus disorder prediction | 65 | 90 | - | - | |
Hepe02g1423 | 759 | MobiDBLite | consensus disorder prediction | 34 | 99 | - | - | |
Hepe02g1423 | 759 | FunFam | Homeobox-leucine zipper protein GLABRA 2 | 265 | 490 | - | - | |
Hepe02g1423 | 759 | Gene3D | - | 80 | 163 | - | - | |
Hepe02g1423 | 759 | SUPERFAMILY | Bet v1-like | 258 | 492 | - | - | |
Hepe02g1423 | 759 | Coils | Coil | 202 | 222 | - | - | |
Hepe02g1423 | 759 | Coils | Coil | 150 | 180 | - | - | |
Hepe02g1423 | 759 | ProSiteProfiles | START domain profile. | 256 | 494 | IPR002913 | GO:0008289(InterPro) | |
Hepe02g1423 | 759 | SMART | HOX_1 | 93 | 155 | IPR001356 | GO:0003677(InterPro) | |
Hepe02g1423 | 759 | SUPERFAMILY | Homeodomain-like | 81 | 152 | IPR009057 | - | |
Hepe02g1423 | 759 | ProSitePatterns | 'Homeobox' domain signature. | 126 | 149 | IPR017970 | GO:0000981(InterPro)|GO:0006355(InterPro) | |
Hepe02g1423 | 759 | SUPERFAMILY | Bet v1-like | 534 | 721 | - | - | |
Hepe02g1423 | 759 | Gene3D | - | 265 | 491 | IPR023393 | - | |
Hepe02g1423 | 759 | Pfam | START domain | 269 | 491 | IPR002913 | GO:0008289(InterPro) | |
Hepe02g1423 | 759 | FunFam | Homeobox-leucine zipper protein HDG1 | 79 | 167 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g1423 | Hepe-Chr2:18101679 | Hepe03g0511 | Hepe-Chr3:8847067 | 6.75e-169 | dispersed | |
Hepe02g1423 | Hepe-Chr2:18101679 | Hepe03g1543 | Hepe-Chr3:72277456 | 9.58e-259 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55036 | PF01852 | START | 2.00E-54 | CL0209 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g1423 | K09338 | - | csv:101221341 | 1279.62 |