Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g1445 ATGTTTTGGTCAATGAATCCTGTACGAATTCGCAATTTGTTCTTCTTCCTTCTATACTTCATTCTTCTTCTTCAAGATCATTCACTTTGTTCCTCTTATCCCACACCCTTAAATTGTACGGATACAACCCGTTTATGCACCTCGTTTCTGGCCTTCAAGCCTCACCCAAATCAGACCCTCTCTGTGATCCAGAGTATGTTCGACGTATTGCCTGAAGATGTTACTGTCGAAGGCAATGGCCGGGACACTGTGTTCATCAGGAAGAATTGCTCCTGTGCTTCTGGATTGAAGAAATACATCACCAACACTACTTATACCATAAAATCGAATCGGGGTTATGTGTATGGCATAGTCATGGAGGCGTATGATGGGCTTGCTTTGTTGCCCAACACGACCCGAATGGCGAGGAATGGCGCTGTTGTGTCTTTGAGGCTGTTTTGTGCCTGCTCTAGCGGGTTGTGGAACTATTTGATGAGCTATGTGATGAGAGATGGCGATTCCATTGAGTCTTTGGCTAGCCGATTTGGGGTTAGTATGGATAGCATTGAGTCGGTGAATGGAATTGAAAATCCTGGCAATGTCACTGTGGGTGCTTTGTATTACATTCCCTTGAATTCGGTTCCTGGTGATCCTTATCCATTGGAGACTGATATTTCTCCTGCTCCGGCTCCTGCTCCTGCTCCTTCCTTTTCTCTGAGCAATTTCTCAGATAATGCTGAGAACCCCAAGCGTCATCCTCCATATATATGGATTGTTGGAAGTTTGGGAATTATTCTTGTTCTGATTTTATTAGGCATAGTAGGTTATGCTTGCTTCAGGTGGTTGAAATGCTGTTCTAGATCGAGGAGTAGCCACTCCAAAGATCCCGGTGGCAAGGTTTCCCACAAGTTCCATATTCTTGGGAAGTCAAGTTTCTGTTGTGCTTCAGGAAGGTATATTTGCTGCAGTTCTGCAGATTGGAAACAAGCCAACAGGGAATCTAGCGATAACCAGAGCGCAATTCCAAAAGCTATCGAGAGCAATGTCTTCAATGTAGAAAAACCTGTAGTTTTCTCATGCGAAGAAATTTCTTCCTCAACCGATGGTTTCTCTGATTCAAGTCTACTTGGCCACGGAACATATGGTTCGGTGTATTATGGCATCCTGCGTGACCAGGAAGTTGCTATAAAAAGAATGACTGCAACGAAAACTAAAGAGTTTATGGCAGAGATGAAACTCCTCTGCAAGGTTCATCATGCAAACCTGGTAGAATTGATTGGTTATGCAGCCAATGAGGAGGAGCTCTTTCTTATTTATGAATATGCTCAAAAAGGTCCACTCAAAAGTCATTTACATGATCCTCTGAACAAGGGTCATACATCATTATCTTGGATTATGAGACTCCAAATTGCTTTGGACGCTGCTAGAGGTCTCGAATACATTCACGAGCATACTAAAACTCATTATGTCCATAGAGATATCAAGACAAGCAACATCTTACTTGATGGTTCTTTTCGGGCAAAGATTTCTGACTTTGGGTTGGCCAAACTTGTTGGAAAAACAAATGAGGGTGAAGCTACAGTAACCAAAGTTGTCGGTACATACGGGTATCTGGCTCCTGAATATTTGAGTAACGGTCTTGCTACAACCAAAAGTGATGTGTATGCTTTCGGCGTCGTTCTTTTTGAGCTTGTAACTGGAAAGGAGGCAATTATACGAACTGAGGGCACAACTATGAAAAATCCCGAAAGACGTTCACTAGCATCCATTATGTTAGCTGTTCTTCGGAACGTGCCCGATCCTATGAATATGGCAAGTCTGAAAGATCAAGTTGATCCAAGTATGATGGATTTGTATCCTCATGACTGTCTATTCAAGGTGGCCATGTTGGCAAAGCAGTGTGTGGATGAGGATCCCATCTTACGACCCGACATGAAGCAAGTCGTAATATCCTTGTCACAGATCCTACTCTCTTCAGTCGAGTGGGAAGCGACTTTAGCTGGTAACAGCCAAGTTTTCAGTGGTCTTGTCCAAGGAAGATAG 2022 43.27 MFWSMNPVRIRNLFFFLLYFILLLQDHSLCSSYPTPLNCTDTTRLCTSFLAFKPHPNQTLSVIQSMFDVLPEDVTVEGNGRDTVFIRKNCSCASGLKKYITNTTYTIKSNRGYVYGIVMEAYDGLALLPNTTRMARNGAVVSLRLFCACSSGLWNYLMSYVMRDGDSIESLASRFGVSMDSIESVNGIENPGNVTVGALYYIPLNSVPGDPYPLETDISPAPAPAPAPSFSLSNFSDNAENPKRHPPYIWIVGSLGIILVLILLGIVGYACFRWLKCCSRSRSSHSKDPGGKVSHKFHILGKSSFCCASGRYICCSSADWKQANRESSDNQSAIPKAIESNVFNVEKPVVFSCEEISSSTDGFSDSSLLGHGTYGSVYYGILRDQEVAIKRMTATKTKEFMAEMKLLCKVHHANLVELIGYAANEEELFLIYEYAQKGPLKSHLHDPLNKGHTSLSWIMRLQIALDAARGLEYIHEHTKTHYVHRDIKTSNILLDGSFRAKISDFGLAKLVGKTNEGEATVTKVVGTYGYLAPEYLSNGLATTKSDVYAFGVVLFELVTGKEAIIRTEGTTMKNPERRSLASIMLAVLRNVPDPMNMASLKDQVDPSMMDLYPHDCLFKVAMLAKQCVDEDPILRPDMKQVVISLSQILLSSVEWEATLAGNSQVFSGLVQGR 673
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 18464451 18470035 - Hsped.02g14450.1 Hepe02g1445 562946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g1445 673 SMART LysM_2 159 203 IPR018392 -
Hepe02g1445 673 Gene3D LysM domain 155 208 IPR036779 -
Hepe02g1445 673 SUPERFAMILY Protein kinase-like (PK-like) 344 645 IPR011009 -
Hepe02g1445 673 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 13 662 IPR044812 GO:0019199(InterPro)|GO:0045087(InterPro)
Hepe02g1445 673 FunFam PTI1-like tyrosine-protein kinase 3 435 659 - -
Hepe02g1445 673 Pfam Protein tyrosine and serine/threonine kinase 368 643 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g1445 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 482 494 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g1445 673 Gene3D Phosphorylase Kinase; domain 1 334 434 - -
Hepe02g1445 673 SMART serkin_6 363 650 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g1445 673 FunFam Kinase family protein 338 434 - -
Hepe02g1445 673 SUPERFAMILY LysM domain 158 203 IPR036779 -
Hepe02g1445 673 ProSiteProfiles LysM domain profile. 158 202 IPR018392 -
Hepe02g1445 673 Gene3D Transferase(Phosphotransferase) domain 1 436 660 - -
Hepe02g1445 673 ProSiteProfiles Protein kinase domain profile. 363 650 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g1445 673 ProSitePatterns Protein kinases ATP-binding region signature. 369 390 IPR017441 GO:0005524(InterPro)
Hepe02g1445 673 Pfam LysM domain 163 197 IPR018392 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1445 Hepe-Chr2:18464451 Hepe10g1608 Hepe-Chr10:52799028 8.84e-119 dispersed
Hepe08g0905 Hepe-Chr8:8301039 Hepe02g1445 Hepe-Chr2:18464451 3.70e-41 dispersed
Hepe10g1449 Hepe-Chr10:51279031 Hepe02g1445 Hepe-Chr2:18464451 2.48e-42 dispersed
Hepe10g1770 Hepe-Chr10:54466366 Hepe02g1445 Hepe-Chr2:18464451 1.46e-30 dispersed
Hepe02g1445 Hepe-Chr2:18464451 Hepe05g1605 Hepe-Chr5:65748206 2.60e-63 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72559 PF07714 PK_Tyr_Ser-Thr 2.00E-49 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g1445 - - - 0.0