Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g1460 ATGGCCGCTGTCAGCTTCTTCCTTTCTCTTCTCTCCCTTGCTGCTCTCCCATGTTTCGTTTCCACCCAGAATCCTTCGGGCTTCATCAGTTTAGATTGCGGACTCCCGGCTGGCGCTAGATACCAAGAGTCGAATAGCGGCATAATCTACGATTCCGACGCGACATTCATAGACACCGGCACAATCCACAACATATCCTCCGATAGCATCAAAAACCACACCCAACAGCTATGGAGTCTTAGAAGCTTTCCTGAAGGGACCAGAAATTGCTACAAAGTTGGAGTGACAGCCGACACCAAATACTTGATTCGAGCTAGCTTTCTGTATGGCAACTATGACGGTCGAAAACAACTCCCTAGCTTCGATCTCCATTTCGGACCCAACTTTTGGACTTCTGTCAATCTGGATGCAATCGACATGCCCAAGCATTTGGAGATTATACATGTCGTTTCCTCGAATTATGCAGAAGTTTGCCTCATCGACACCGGTGTCGGAACTCCGTTCGTTTCGGCTCTGGAGCTTAGGCCTTTAAACAACTTGTCTTACCCAATAGGCTCACCGTCGATGTCGTTGGCCAATGTCCTCCGCCTCGATGTGGGCTCTGTTAACCACCAAACTTACAGGTACAAAGATGACGTTTACGATCGCATTTGGGTGCCCATGGCTCCACTTCCAGAATGGAGTTCAATAACCACACCGGATCCGATAGATGTCAATGAGTCGATGTTCTTCTTACCAGCTCCGGCGGTGATGAAGTCGGCGGCGACCCCAAAAGATGCCTCTACTCCATTACAATTCCTATGGAATTCACCGGACAGAGCCACAAAGTTTTTCTTCTACATGTACTTTTCAGAGCTTCGGAGGCTTCAATCCAACGAGTCCAGATCGTTCAACATAATGCTCAATGGCAAAAGTTGGTATAGTAAACCAATTTCTCCACCTTACTTGGACGTACTTATCGTTTACAGTACCGGACCGTCCACCGGTCGGATGTTCGATTTCTCCTTCAACAAAACCTCCAATTCCACCCTTCCTCCTGTCCTCAACGCCATTGAAGCTTATAGTGTCATTGATAATTTCCTTTTATCTGAGACAAACCAACAAGATGTTGAGAGCATTTCAAGTGTCAAGAAAGTTTATGGAGTTCAAAGAAACTGGCAAGGAGATCCCTGTGCCCCTATAGAATTTATTTGGCAAGGAGTCAAATGTAGCTCTCTGGTTTCTGAGCCTCCCAGAATTACATCTTTGGATTTGTCCTCTAGTGGAATCACAGGGAAAATAGCTGAAGACATAGCTAATCTTACAATGCTAGAAACTCTGGATTTGTCAAACAATAGCTTAAGCGGAACAGTGCCTGAGTTTCTTGCTCAAATGCCATCATTGAAGGTCTTAAATTTGGAAAGGAACAAACTTTCAGGACTTATTCCTTTCCAACTCATTGAAAAGTCTAATGACAATTCTTTATCCTTAAGCTTCGGTGAAAATCCAAACCTGTACATCACAGCTCCAAGTGAAGAAAAGAAACGCAGCATAATCGTTCCTATAGCAGCAGCATCAGTTGGTGGATTTGTTCTTTTGTTCTTAATTTCAGGTGTTATCTTTTGGAGGATCAAGACTAAACAAACAAAACAACAAAGAAGAACCAAATTAAATAACGTGGACCAATCTCAACAATGGGGTGCAACCAACAAATGTTATTCTTACTCCGATATCCTAAGAATGACGAATAATTTTGAGCGACCTCTCGGAGAAGGTGGCTTTGGAAGAGTTTACTATGGCCAGATCCACAACACTGAAGTAGCTGTTAAGATGCTTTCTCCTCAATCAGCTCAAGGGTATCAACAATTTCAAGCAGAGGTTGACACTCTCGTGAGGGTTCATCACAAAAACTTGACTGGTCTTGTTGGATATTGTAATGAATCTACCAAGAAAGGACTAATCTATGAATATATGGGGAGAGGGAACTTGGGATCTCATATTTCAGGTGGCCAATCAACAAAGGTTTTGAAATGGAAAGATAGGCTTCTCATAGCAGTTGATGCAGCACATGGATTGGAGTATCTTCATTATGGTATCAAACCTGCTATAATACATAGAGATGTTAAATCTACGAACATCTTATTAGACAACAACTTTCGAGCAAAAATATCTGATTTTGGATTATCGAGAAATTTGTTTATGGAAGGTAGCGCCACTCATGTGACAACTACTAATGTAGTCGGTACTCATGGCTACATTGACCCGGAATACCACTCATCGTTTAGACTAAACGAGAAAAGTGACGTGTATGGATTTGGAGTGATTCTTCTTGAAATTATAACTGGAAAGCCAGTTTTGATAAGAACTGAAGACCAAACAATTCATGTCTATCAATGGGTCAAACCGTTGCTCTATCGAGGCGATATTCGGTCGATCATCGACCCGCAAATAGAAGAAGATATGGAGGTAAACTCTGTTTGGAAAGCAGTTGAAATAGCAATGTTTTGTGCATCCATAAAGTCTGTAGATAGACCGAATATGAGCCAAGTTGTAGTGGAGTTGAAGGAATGCTTAGCCATGGAATTGGCTCGTCATAATCATAGCCAACCTGATCCGGTGGTTGCAGATTCCAGTGTTCTATTTGGCCCCTTGGCAAGGTAG 2640 42.8 MAAVSFFLSLLSLAALPCFVSTQNPSGFISLDCGLPAGARYQESNSGIIYDSDATFIDTGTIHNISSDSIKNHTQQLWSLRSFPEGTRNCYKVGVTADTKYLIRASFLYGNYDGRKQLPSFDLHFGPNFWTSVNLDAIDMPKHLEIIHVVSSNYAEVCLIDTGVGTPFVSALELRPLNNLSYPIGSPSMSLANVLRLDVGSVNHQTYRYKDDVYDRIWVPMAPLPEWSSITTPDPIDVNESMFFLPAPAVMKSAATPKDASTPLQFLWNSPDRATKFFFYMYFSELRRLQSNESRSFNIMLNGKSWYSKPISPPYLDVLIVYSTGPSTGRMFDFSFNKTSNSTLPPVLNAIEAYSVIDNFLLSETNQQDVESISSVKKVYGVQRNWQGDPCAPIEFIWQGVKCSSLVSEPPRITSLDLSSSGITGKIAEDIANLTMLETLDLSNNSLSGTVPEFLAQMPSLKVLNLERNKLSGLIPFQLIEKSNDNSLSLSFGENPNLYITAPSEEKKRSIIVPIAAASVGGFVLLFLISGVIFWRIKTKQTKQQRRTKLNNVDQSQQWGATNKCYSYSDILRMTNNFERPLGEGGFGRVYYGQIHNTEVAVKMLSPQSAQGYQQFQAEVDTLVRVHHKNLTGLVGYCNESTKKGLIYEYMGRGNLGSHISGGQSTKVLKWKDRLLIAVDAAHGLEYLHYGIKPAIIHRDVKSTNILLDNNFRAKISDFGLSRNLFMEGSATHVTTTNVVGTHGYIDPEYHSSFRLNEKSDVYGFGVILLEIITGKPVLIRTEDQTIHVYQWVKPLLYRGDIRSIIDPQIEEDMEVNSVWKAVEIAMFCASIKSVDRPNMSQVVVELKECLAMELARHNHSQPDPVVADSSVLFGPLAR 879
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 18765515 18774390 + Hsped.02g14600.1 Hepe02g1460 562961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g1460 879 ProSiteProfiles Protein kinase domain profile. 576 851 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g1460 879 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 651 860 - -
Hepe02g1460 879 SMART serkin_6 576 851 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g1460 879 ProSitePatterns Protein kinases ATP-binding region signature. 582 603 IPR017441 GO:0005524(InterPro)
Hepe02g1460 879 PANTHER OS07G0107800 PROTEIN-RELATED 22 855 - -
Hepe02g1460 879 CDD STKc_IRAK 582 849 - -
Hepe02g1460 879 Gene3D Transferase(Phosphotransferase) domain 1 651 868 - -
Hepe02g1460 879 Gene3D Phosphorylase Kinase; domain 1 548 650 - -
Hepe02g1460 879 ProSitePatterns Serine/Threonine protein kinases active-site signature. 696 708 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g1460 879 FunFam Leucine-rich repeat receptor-like kinase 368 501 - -
Hepe02g1460 879 Gene3D Ribonuclease Inhibitor 370 490 IPR032675 -
Hepe02g1460 879 Pfam Leucine rich repeat 411 471 IPR001611 GO:0005515(InterPro)
Hepe02g1460 879 Pfam Malectin-like domain 31 356 IPR024788 -
Hepe02g1460 879 SUPERFAMILY L domain-like 398 484 - -
Hepe02g1460 879 Pfam Protein tyrosine and serine/threonine kinase 578 790 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g1460 879 FunFam Leucine-rich repeat receptor-like protein kinase 550 650 - -
Hepe02g1460 879 SUPERFAMILY Protein kinase-like (PK-like) 556 847 IPR011009 -
Hepe02g1460 879 PRINTS Leucine-rich repeat signature 458 471 - -
Hepe02g1460 879 PRINTS Leucine-rich repeat signature 437 450 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1460 Hepe-Chr2:18765515 Hepe02g1462 Hepe-Chr2:18791422 0.0 dispersed
Hepe02g1459 Hepe-Chr2:18703156 Hepe02g1460 Hepe-Chr2:18765515 0.0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72562 PF12819 Malectin_like 1.20E-103 CL0202 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g1460 - - - 0.0