Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g1462 ATGGCAACTCTCCAATTCTTCATCCTCCTCCTTCTTTCCACTTCCGTTTCTGCACAGAATCCTTCAGGTTTCATCAGTTTAGTCTGCGGAATTCCGGCGAACTCCACATACACAGAGCCGAACACCGGAATAATCTACGAATCCGATGCGGCGTTCATAAATTCCGGCGAAGTCCACAACATTTCCACCGATAGCAGACAGAGCGGCTTGAGACAGCCGCTGTGGAATCTGAGGAGCTTTCCGGAAGGGATAAGGAATTGCTACAAATTGAAGGTTAGGTCAGGGACGAAGTATTTGATTCGAGCGGCATTTCTGTACGGAAATTACGACGGTCGGAGGAATTCGCCTGGATTCGATCTGTATTTGGGAGCGAACTTTTGGGATTCGGTTGCGTTTGAGGGGAATTCTTCTGTGGTTAAGGAGATTGTTCATGTAGTTTCGTCGAGTGATGTAGACATTTGTGTTGTGAATGTTGGTACTGGAATTCCGTTCATTTCTGCTCTGGAATTCAGGCCGCTGAAAGACTCTGTTTACGATACCGGATCTCTGACGGTGGCTAGTTTCCTCCGGCTGGATTATGGCTCCGTTCGAAACCAAGTTATCAGGTATAAAGACGACGTCTACGATCGAATCTGGGCTCCACCAGTTCCAAACCAAAAATGGACAACCATAAACACTTCGGAGACAGTAGCCGTCGACGACCCGCTCTTCTTCCAGCCGGCTCCGGCAGTCATGAACACGGCGGTGACGCCGATAAACGCAAGCGATCCGATGGTGCTCAGTTGGGTGCCGCCGGATCCCACGTCGGCGTTTTTCGTCTACATGTACTTTGCGGAGCTGAAGGTGCTTCAAGCGAACGAGTCCAGAGAGTTCAACGTATTTCTGAATGGAAAACTGTGGCATAATGAATCGCTTTCTCCTGGCTATTTATCCGAATTGGCCTTTTACAGTACCACACCTCTGACCGGCGGAACCTACGAGATCTCCTTCGTCAGAACTGCCAATTCAACCCTTCCTCCGATCCTCAATGCTCTTGAAATTTATCGAGTCCTTAATTTCTCCCAATCCGAGACCAATGGAGAAGATGTTGTCGCCATTGAAAATATCAAGACAACGTATGGAGTTGGAAAAAACTGGCAAGGAGATCCCTGTGCCCCAAGGGAATTAATATGGCTGGGAGTCAACTGTAGCTTTGTGGATTCTGAGCCTCCCAGAATCACATCGTTGGATTTGTCCTCCAGTGGACTGACAGGGGAAATACTTCGAGAGATTGCAAATCTTAAAATGCTGGAGGCTTTAGATCTATCAAACAATAATTTGAGCGGACCAGTACCTGAATTTCTCACTCAATTGCCATCATTGCGAGTCCTAAACTTGGAGAAAAACAAGCTTTCAGGACTAATTCCGGCCCAGCTCGTAGAAAAGTCCAATAATGGCTCTCTGTTATTAAGATTTGGCGAAAATCCTAATCTGTTTACTACGGCTCCAAGCAAAAAGAAGGGAAACCATGTTGTTGTTCCTGTAGTAGCATCAGTTGTTGGATTTTTTCTGCTTTCGTTCTTAATTGCAGCAGCTATCTTTTGGAGGACAAGAAGAAGAAAATCAAAAGGAGCTGTAATTGGAGTGGGGAAACAAACTGTTGGTCAATCTCAAAATTGGGACACGGCTCAGAGATGCTATTCATACTCGGATGTCCTAAGAATGACAAACAATTTTGAGCGTATGCTTGGAGAAGGTGGCTTTGGACGAGTTTACTACGGTAAAATCGAGAACGTCGAAGTAGCTGTAAAAATGCTATCTCCTCGATCAGTTCAAGGGTATCAACAATTTCAGGCAGAGGTTGACCTTCTTATGAGGGTTCATCATAGAAACTTGACTGGTCTGGTTGGATATTGCAATGAACCATCCAACAAAGGACTTATCTATGAGTACATGGGCAGAGGGAACTTGGGATCTATCATGTCAGATGGCAAGTCAGATTTGTTGAACTGGGAAGACAGACTTCATATAGCAGTGGATGCAGCACAAGGATTGCAATACTTGCATTCTGGTATAAAGCCAGCTATTGTACATAGAGATGTAAAATCTTCCAACATCTTATTGGACGACAACTTTCGAGCAAAAGTATCTGATTTCGGCTTGTCGAGAATTTTTCCTGTCGACGATGGTGCCACTCATGTGACAACGAATGTAGTTGGCACTCCTGGTTACCTCGATCCTGAATACTACACATCTTATAGATTAAACGAAAAAAGCGACGTTTATGGCTTCGGAATTGTTCTTCTAGAAATCATAACAGGAAGACCAGTTTTGACAAAGACTCTAGACAAGGTAACTCACATCTATCAATGGGTTGACTCGATGCTTTCTCAAGGCGATATCAGCTCCATTATCGATCCAAAATTGAAAGAAAGTTTCGATGTGAACACCATTTGGAAAGCGGTTGAAGTGGCGATGTCCTGCGTATCTCCCGCCTCTACAAATAGGCCAACCATGAGCCAAGTTGTGATAGATTTGAATGAATGTTTGAATATGGAGTTAGCTCACAATAACAACAATCACCAACCTGAATCAGTAGTTGAAGATCACATTTCTCTGTTTGGTCCAGAAGCAAGGTAA 2619 44.6 MATLQFFILLLLSTSVSAQNPSGFISLVCGIPANSTYTEPNTGIIYESDAAFINSGEVHNISTDSRQSGLRQPLWNLRSFPEGIRNCYKLKVRSGTKYLIRAAFLYGNYDGRRNSPGFDLYLGANFWDSVAFEGNSSVVKEIVHVVSSSDVDICVVNVGTGIPFISALEFRPLKDSVYDTGSLTVASFLRLDYGSVRNQVIRYKDDVYDRIWAPPVPNQKWTTINTSETVAVDDPLFFQPAPAVMNTAVTPINASDPMVLSWVPPDPTSAFFVYMYFAELKVLQANESREFNVFLNGKLWHNESLSPGYLSELAFYSTTPLTGGTYEISFVRTANSTLPPILNALEIYRVLNFSQSETNGEDVVAIENIKTTYGVGKNWQGDPCAPRELIWLGVNCSFVDSEPPRITSLDLSSSGLTGEILREIANLKMLEALDLSNNNLSGPVPEFLTQLPSLRVLNLEKNKLSGLIPAQLVEKSNNGSLLLRFGENPNLFTTAPSKKKGNHVVVPVVASVVGFFLLSFLIAAAIFWRTRRRKSKGAVIGVGKQTVGQSQNWDTAQRCYSYSDVLRMTNNFERMLGEGGFGRVYYGKIENVEVAVKMLSPRSVQGYQQFQAEVDLLMRVHHRNLTGLVGYCNEPSNKGLIYEYMGRGNLGSIMSDGKSDLLNWEDRLHIAVDAAQGLQYLHSGIKPAIVHRDVKSSNILLDDNFRAKVSDFGLSRIFPVDDGATHVTTNVVGTPGYLDPEYYTSYRLNEKSDVYGFGIVLLEIITGRPVLTKTLDKVTHIYQWVDSMLSQGDISSIIDPKLKESFDVNTIWKAVEVAMSCVSPASTNRPTMSQVVIDLNECLNMELAHNNNNHQPESVVEDHISLFGPEAR 872
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 18791422 18797881 + Hsped.02g14620.1 Hepe02g1462 562963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g1462 872 SMART serkin_6 570 843 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g1462 872 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 645 852 - -
Hepe02g1462 872 SUPERFAMILY L domain-like 372 474 - -
Hepe02g1462 872 Gene3D Ribonuclease Inhibitor 363 482 IPR032675 -
Hepe02g1462 872 PANTHER OS07G0107800 PROTEIN-RELATED 17 847 - -
Hepe02g1462 872 SUPERFAMILY Protein kinase-like (PK-like) 552 839 IPR011009 -
Hepe02g1462 872 Pfam Leucine rich repeat 404 464 IPR001611 GO:0005515(InterPro)
Hepe02g1462 872 ProSitePatterns Serine/Threonine protein kinases active-site signature. 689 701 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g1462 872 Gene3D Transferase(Phosphotransferase) domain 1 645 865 - -
Hepe02g1462 872 FunFam Leucine-rich repeat receptor-like protein kinase 548 644 - -
Hepe02g1462 872 PRINTS Leucine-rich repeat signature 430 443 - -
Hepe02g1462 872 PRINTS Leucine-rich repeat signature 451 464 - -
Hepe02g1462 872 Pfam Protein tyrosine and serine/threonine kinase 572 838 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g1462 872 Pfam Malectin-like domain 29 350 IPR024788 -
Hepe02g1462 872 ProSiteProfiles Protein kinase domain profile. 570 843 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g1462 872 ProSitePatterns Protein kinases ATP-binding region signature. 576 597 IPR017441 GO:0005524(InterPro)
Hepe02g1462 872 Gene3D Phosphorylase Kinase; domain 1 552 644 - -
Hepe02g1462 872 FunFam Leucine-rich repeat receptor-like kinase 361 494 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1457 Hepe-Chr2:18661676 Hepe02g1462 Hepe-Chr2:18791422 1.08e-23 dispersed
Hepe02g1459 Hepe-Chr2:18703156 Hepe02g1462 Hepe-Chr2:18791422 0.0 dispersed
Hepe02g1460 Hepe-Chr2:18765515 Hepe02g1462 Hepe-Chr2:18791422 0.0 dispersed
Hepe02g1462 Hepe-Chr2:18791422 Hepe03g1490 Hepe-Chr3:71729185 2.78e-247 dispersed
Hepe02g1462 Hepe-Chr2:18791422 Hepe02g1463 Hepe-Chr2:18799846 2.93e-284 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72563 PF12819 Malectin_like 5.00E-109 CL0202 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g1462 - - - 0.0