Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g1473 | ATGCAAGACCCATCAACATTTCAGCCGATTAAACCCCAATTTCCAGAACAAGAGCAACTCAAATGCCCTCGTTGTGATTCTGCAAACACCAAATTTTGCTATTACAATAATTATAATCTTTCTCAGCCTCGTCACTTTTGCAAGAATTGCCGCCGGTACTGGACCAAAGGCGGTGCTCTTCGCAACATCCCCGTCGGCGGCGGCAGCCGGAAAAATTCCAAGCGGACGGCGGCGCCGGTGTCGACCTCCATCAAACGCCCGCCATCCTCCTCGTCTTCCTCTTCTTCGACCTCCACACAGAACCCGATTACGGGTTCGGATCACAACCCGATCCGGGGTTACGGTGGGTTGGATATTCCGGGGAGCTTCAGTTCGCTGCTGGCATCGAATGGGCAATTTGGGAATCTCTTGGAGGGTGTCGATCCGAATCAATCGGAGCTGAAAATGATGGAATTGGGTGGTTTTTCAGAGAATTTGAATTCTGGGTCTGGCCGGAAATCTGCAGCGGAGGAACAGAGCGCCGCCGTGCAGGGGAATTATTTGGGTGTTTTGCAAAACGGAGATTCTAGTTGTTGGACCGGCGGCGGGAGTAATGGATGGCCTGATCTTGCCATTTTCACACCAGGGTCAAGTTATCAGTAA | 642 | 51.56 | MQDPSTFQPIKPQFPEQEQLKCPRCDSANTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSRKNSKRTAAPVSTSIKRPPSSSSSSSSTSTQNPITGSDHNPIRGYGGLDIPGSFSSLLASNGQFGNLLEGVDPNQSELKMMELGGFSENLNSGSGRKSAAEEQSAAVQGNYLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ | 213 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 19095389 | 19096030 | - | Hsped.02g14730.1 | Hepe02g1473 | 562974 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g1473 | 213 | ProSiteProfiles | Zinc finger Dof-type profile. | 20 | 74 | IPR003851 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
Hepe02g1473 | 213 | MobiDBLite | consensus disorder prediction | 61 | 114 | - | - | |
Hepe02g1473 | 213 | Pfam | Dof domain, zinc finger | 18 | 74 | IPR003851 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
Hepe02g1473 | 213 | MobiDBLite | consensus disorder prediction | 74 | 107 | - | - | |
Hepe02g1473 | 213 | ProSitePatterns | Zinc finger Dof-type signature. | 22 | 58 | IPR003851 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
Hepe02g1473 | 213 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-RELATED | 15 | 129 | IPR045174 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g1473 | Hepe-Chr2:19095389 | Hepe04g1213 | Hepe-Chr4:67450637 | 5.24e-37 | dispersed | |
Hepe02g1473 | Hepe-Chr2:19095389 | Hepe10g0692 | Hepe-Chr10:9144633 | 5.16e-36 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55041 | PF02701 | zf-Dof | 2.10E-33 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g1473 | - | - | - | 0.0 |