Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g1475 ATGAGTCGGGAACAGAAGCGGGGGAGGCAGGACAAAGGTTCTGATGATGTCCAGAAGGTGATTGTTGCAGTGAAGGCTTCCAAAGAAATTCCTAAAACTGCATTGGTTTGGGCGTTGACTCATGTTGTTCAAATTGGAGATTGTATAACTCTGCTGGTTGTTGTCCCTTCTCAAAGCTCTGGTAGAAAATTCTGGGGTTTTCCGAGATTCGCCGGGGATTGTGCAAGTGGTCACAAGAAAGCTCACTCTGGAACGAGCTCAGAGCTGAAATGTGATATTACCGATTCCTGCTCGCAGATGATTCTTCAGCTTCATGATGTTTATGATCCAAATAAGATAAATGTGAAAATTAAAATTGTATCGGGGTCGCCTAGTGGGGCCGTAGCTGCTGAGGCTAAGAGAGCTCAAGCTAGCTGGGTTGTATTAGACAAACAGCTCAAACACGAGGAAAAATGTTGCATGGAGGAGTTACAGTGCAACATTGTGGTAATGAAGCGATCACAACCAAAAGTTCTTCGCTTGAACCTGGTTGGGTCTCCAAAGAAGGAACCAGAAGTGCCCTCTCCATTACCTTCTGATATAGATGAAGGGTCTGATGGCCATCAAAAAGACAATAGTGATCCTCTGGATTTTATTCGGGGACCAGTTGTGACCCCCAGTAGCAGTCCAGAGTTGGGCACACCTTTTACCACTACCGAAGCTGGAACATCATCAGTGTCAAGCTCAGATCCTGGAACTTCACCATTTTTCAACTCTGAAATGAATGGAGACACAAAGAAAGAGGAATTGTTTGTTATCAAGGAAAATAAAGAACTTGATGCTGCTAGTTCAGATTCAGATATTGAAAATTTATCTGTATCTTCGGCGAGCTTAAGATTCCAACCATGGATGACAGAGTTTCTAAGTTCTCATCTTCAATCTTCACAACACATAAGTGGAAGGTCACAGAGATGTGATGATAGGAATCAAGTGTCAACAAGAAAATCTTTTCTACCAAAGTCTTCAAAACTTGACAGAGAATCTAGTATTGGAATGTCAAGCCATAGAAGTGACAATGATTTCCATGGGGACGTACGAGATGCAGTTTCATTATCCAGGAACTCGCCACCAGGCCCCCCTCCATTATGTTCAATATGTCAACACAAGGCACCAGTTTTTGGAAAGCCTCCAAGGTGGTTTAGCTATGCTGAGCTGGAGCACGCTACAGGTGGATTTTCACAAGCCAACTTTTTGGCAGAAGGAGGATATGGATCTGTTCACAGAGGGGTACTCCCGGATGGACAGGTGGTCGCTGTCAAGCAGCACAAACTAGCTAGTTCTCAGGGAGACCTTGAATTTTGTTCAGAAGTCGAAGTTCTTAGCTGTGCACAGCATCGAAACGTTGTTATGTTGATTGGCTTTTGTATAGAGGAGAAAAGAAGGTTGTTGGTTTATGAATACATCTGCAATGGCTCATTGGATTCTCATTTATATGGACGCCAACAAGAGCCATTAGAATGGTCTGCACGGCAAAAAATTGCAGTGGGAGCTGCAAGGGGGCTACGATATCTCCACGAAGAATGTAGAGTTGGTTGCATTGTTCACCGGGATATGCGGCCAAACAACATTCTTATCACCCATGATTTTGAGCCACTGGTTGGAGATTTTGGCCTTGCGAGGTGGCAGCCTGACGGAGATACCGGTGTTGAGACAAGAGTTATTGGAACATTTGGGTATTTGGCTCCAGAGTATGCTCAAAGTGGCCAAATCACAGAAAAAGCTGATGTTTATTCCTTCGGGGTGGTACTGGTGGAGCTAATTACTGGAAGAAAAGCCGTAGACCTTAGTCGGCCAAAAGGTCAACAGTGTCTCACTGAATGGGCACGCCCCCTGTTGGATGAATTTCTCATTGATGAACTGATTGATCCAAGGTTGGAAAATAGCTTCGCAGAGCATGAAGTGTACTGCATGCTGCACGCCGCCTCATTATGCATCCGAAGAGATCCCAACGCAAGGCCTCGTATGTCACAGGTTTTACGGATTCTGGAGGGCGACCTAGTCATGGATTCTAATTACTTGTCAACTCCTGGATACGACGTGGGAAATCGGAGTGGTCGGATGTGGACCGAGCAGCAGCAGCAGCAGCAAAACTACAGTGGCTCCTTATCAGATGAGACCCTAGAGAGGTTCAACGAAAAGGTCTGTATTGAGAGTTTAAGACCAAGTTACTGGGAAAGGGACAGGACAAGGAGAACTTCAAGTGGAAGTGATTTGTAA 2256 45.08 MSREQKRGRQDKGSDDVQKVIVAVKASKEIPKTALVWALTHVVQIGDCITLLVVVPSQSSGRKFWGFPRFAGDCASGHKKAHSGTSSELKCDITDSCSQMILQLHDVYDPNKINVKIKIVSGSPSGAVAAEAKRAQASWVVLDKQLKHEEKCCMEELQCNIVVMKRSQPKVLRLNLVGSPKKEPEVPSPLPSDIDEGSDGHQKDNSDPLDFIRGPVVTPSSSPELGTPFTTTEAGTSSVSSSDPGTSPFFNSEMNGDTKKEELFVIKENKELDAASSDSDIENLSVSSASLRFQPWMTEFLSSHLQSSQHISGRSQRCDDRNQVSTRKSFLPKSSKLDRESSIGMSSHRSDNDFHGDVRDAVSLSRNSPPGPPPLCSICQHKAPVFGKPPRWFSYAELEHATGGFSQANFLAEGGYGSVHRGVLPDGQVVAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEEKRRLLVYEYICNGSLDSHLYGRQQEPLEWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELITGRKAVDLSRPKGQQCLTEWARPLLDEFLIDELIDPRLENSFAEHEVYCMLHAASLCIRRDPNARPRMSQVLRILEGDLVMDSNYLSTPGYDVGNRSGRMWTEQQQQQQNYSGSLSDETLERFNEKVCIESLRPSYWERDRTRRTSSGSDL 751
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 19156125 19161474 + Hsped.02g14750.1 Hepe02g1475 562976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g1475 751 Gene3D HUPs 3 151 IPR014729 -
Hepe02g1475 751 FunFam Dual-specific kinase DSK1-like 11 165 - -
Hepe02g1475 751 ProSitePatterns Tyrosine protein kinases specific active-site signature. 526 538 IPR008266 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g1475 751 PANTHER OS01G0750732 PROTEIN 169 690 IPR050885 -
Hepe02g1475 751 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 377 480 - -
Hepe02g1475 751 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 481 684 - -
Hepe02g1475 751 MobiDBLite consensus disorder prediction 342 360 - -
Hepe02g1475 751 SUPERFAMILY Protein kinase-like (PK-like) 389 685 IPR011009 -
Hepe02g1475 751 CDD STKc_IRAK 411 677 - -
Hepe02g1475 751 Pfam Protein tyrosine and serine/threonine kinase 409 674 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g1475 751 MobiDBLite consensus disorder prediction 220 254 - -
Hepe02g1475 751 Gene3D Phosphorylase Kinase; domain 1 377 480 - -
Hepe02g1475 751 ProSiteProfiles Protein kinase domain profile. 405 686 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g1475 751 Gene3D Transferase(Phosphotransferase) domain 1 481 685 - -
Hepe02g1475 751 MobiDBLite consensus disorder prediction 308 369 - -
Hepe02g1475 751 MobiDBLite consensus disorder prediction 175 255 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1712 Hepe-Chr1:82212479 Hepe02g1475 Hepe-Chr2:19156125 1.67e-190 dispersed
Hepe02g1475 Hepe-Chr2:19156125 Hepe08g1024 Hepe-Chr8:9837175 2.10e-99 dispersed
Hepe01g0934 Hepe-Chr1:73708228 Hepe02g1475 Hepe-Chr2:19156125 3.15e-88 transposed
Hepe02g2746 Hepe-Chr2:75966728 Hepe02g1475 Hepe-Chr2:19156125 1.54e-100 transposed
Hepe02g1475 Hepe-Chr2:19156125 Hepe09g0858 Hepe-Chr9:8486540 1.31e-272 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72565 PF07714 PK_Tyr_Ser-Thr 5.40E-41 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g1475 - - - 0.0