Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g1477 ATGCAACAACATACACACCGACATCACCTCTGGATCAATTTTCTTTTTTGTTTTTGTGGCTCTCTTTTGCAGTGCATATTTTCTGGAGGAAAGCGTAGCTATGTGACCATCGAGATAGACAACAAAGAGGTTGCTCAGACAAGCCATGAATCCGACCGTGTTTGGAACCAGACATTCCGAGTTCTATGTGCGCATCCATTGACTTCTACTGTCACCATTACAATGAAAACATCTCGTTCTGTCTTAGGTAAATTCCAAATCCAAGCCCAACGGATTTTGAAAGAAGCAAGTTTCATCAATGGTTTCTTTCCACTTCTTATGGAAAATGGGAAGCCGAGCTCGGAGCTCAGACTTCGATTCATGCTATGGTTTAAACCAGCAGTATATGAATTAAGTTGGAAAAAGATGCTGGGAAATGGAGAGTACAAGGGGCTGAGAAATGCAACATTTCCTCTAAGGTCCAACTGTCATGTGACTCTATATCAAGATGCTCATCACCTTCATACTTTTCGACCTCCATTTCATGGTTCGAGTGCGCCAAGAAGGCTATGGGAAGATGTATACAAGGCCATAGATAATGCAAAGCATTTGGTTTACATTGCAGGCTGGTCCTTCAATCCAAAGATGGTGCTGGTAAGAGACTCTCAGACTGATATACCCTATGCTTTAGGAGTAAAGCTTGGTGAGCTTTTGAAGCAGAAAGCAGAGGAAGGAGTAGCTGTGAGAATACTGATTTGGGATGATGAAACATCCCTTCCCATCATCAAGAATGTTGGGATAATGAAAACACATGATGAAGATGCTCGAGCATATTTCTTACACTCGAAAGTTATATGTAGGTTGTGCCCCAAATTACATCCTTTGTCCCCACCAATTTTCTCTCATCATCAGAAAACCATAACCGTAGATGCTCAAACTCACATCAATGCAAGAAACAGAGAGATTATGAGTTTCATTGGGGGTTTAGATCTTTGTGACGGTCGCTACGACACAGAACAACATTCATTGTTCCATACTTTAAATACAGAATCTCACTGCTGTGATTTCTACCAGACGAGTATATCAGGTGCGAAGCTTCAAAAAGGAGGACCAAGAGAGCCATGGCATGATGTTCATGCTTGTGTAACAGGTGAAGCTGCTTGGGATATATTAACAAACTTCGAGCAAAGATGGACTAAGCAATCAGATGCTTCATTGTTACTCCCAACTAGCATCTTATTAAAACTGATGCCTCAGCTCGAATCAAACACAAACCCACAAAAGGATTGGCATGTGCAAGTTTTTCGATCGATTGACCACTTGTCTGCCAGCCAAGTTTTCAGAAACTTGACCGTTGAAAGAACGATCCACGAAGCTTATGTCGAAGCTATCAGGCGAGCCGAGAGATTTATTTACATCGAAAACCAATATTTCCTTGGAGGGTGCCACTTGTGGGACGAAGATCAACACTGTGGATGCACGAATTTGATACCGGTTGAGATTGCGCTTAAGGTGGCTAATAAGATCAAGGCAAGGGAGAGGTTTGCAGTCTATATAGTGATTCCAATGTGGCCAGAAGGATCACCAGAGAGTGAGTCAGTTGAGGAAATGCTACATTGGACAAGGCAGACAATGACAATGATGTATAGACTGATTGGAGAAGCAATCCAAGAAACTGGGGAGAAGGCCCATCCAAGAGACTACTTAAATTTCTTTTGCCTTGCAAACAGAGAAGAAGAGAGAAAATGGGACTTTGTTCCCCCACACAGTCCCCAACAGGCAACACAGTACTGGAATGCCCAACAACATAGGAGGTTCATGATCTACGTCCATTCCAAGGTCATGATAGTGGACGATTTGTACATTCTGATCGGATCCGCAAACGTAAACCAGAGATCCATGGACGGAGAGCGAGATACAGAGATAGCAATCGGATGCTACCAATTTGAAAACGACGGAGAAGAATTACCAAATGGAAGAGATATTTCAGCATTCCGATTGTCGCTTTGGTACGAACACACCCAACGATTCGAAGAACTGTTCTTAAAGCCGGAAAACTTGCAATGCGTTAAAAGGGTTCGTTCGATAGCAGACGAATCGTGGGAAATTTACAGTGGAGATGAAATTGCAGACATGGAAGGAGTTCATCTGGTAACGTACCCTGTGAAGGTAAAACAGGACGGCTCGATTGAGGATTTGGAAGAGAATGGAGGCGGCCATTTTCCTGATACGAAATGCCCAATTAAAGGAAGAAGATCAATGTTCTTGCCGCCCATTTTCACGACCTAG 2268 42.95 MQQHTHRHHLWINFLFCFCGSLLQCIFSGGKRSYVTIEIDNKEVAQTSHESDRVWNQTFRVLCAHPLTSTVTITMKTSRSVLGKFQIQAQRILKEASFINGFFPLLMENGKPSSELRLRFMLWFKPAVYELSWKKMLGNGEYKGLRNATFPLRSNCHVTLYQDAHHLHTFRPPFHGSSAPRRLWEDVYKAIDNAKHLVYIAGWSFNPKMVLVRDSQTDIPYALGVKLGELLKQKAEEGVAVRILIWDDETSLPIIKNVGIMKTHDEDARAYFLHSKVICRLCPKLHPLSPPIFSHHQKTITVDAQTHINARNREIMSFIGGLDLCDGRYDTEQHSLFHTLNTESHCCDFYQTSISGAKLQKGGPREPWHDVHACVTGEAAWDILTNFEQRWTKQSDASLLLPTSILLKLMPQLESNTNPQKDWHVQVFRSIDHLSASQVFRNLTVERTIHEAYVEAIRRAERFIYIENQYFLGGCHLWDEDQHCGCTNLIPVEIALKVANKIKARERFAVYIVIPMWPEGSPESESVEEMLHWTRQTMTMMYRLIGEAIQETGEKAHPRDYLNFFCLANREEERKWDFVPPHSPQQATQYWNAQQHRRFMIYVHSKVMIVDDLYILIGSANVNQRSMDGERDTEIAIGCYQFENDGEELPNGRDISAFRLSLWYEHTQRFEELFLKPENLQCVKRVRSIADESWEIYSGDEIADMEGVHLVTYPVKVKQDGSIEDLEENGGGHFPDTKCPIKGRRSMFLPPIFTT 755
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 19180457 19184926 + Hsped.02g14770.1 Hepe02g1477 562978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g1477 755 Gene3D Endonuclease Chain A 165 424 - -
Hepe02g1477 755 SMART pld_4 599 626 IPR001736 GO:0003824(InterPro)
Hepe02g1477 755 SMART pld_4 293 328 IPR001736 GO:0003824(InterPro)
Hepe02g1477 755 SUPERFAMILY Phospholipase D/nuclease 137 402 - -
Hepe02g1477 755 Pfam Phospholipase D C terminal 671 744 IPR024632 -
Hepe02g1477 755 SUPERFAMILY Phospholipase D/nuclease 417 682 - -
Hepe02g1477 755 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 29 122 IPR035892 -
Hepe02g1477 755 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 599 626 IPR001736 GO:0003824(InterPro)
Hepe02g1477 755 Pfam Phospholipase D Active site motif 601 626 IPR001736 GO:0003824(InterPro)
Hepe02g1477 755 CDD PLDc_pPLD_like_2 441 641 - -
Hepe02g1477 755 PIRSF PLD_plant 25 755 IPR011402 GO:0004630(InterPro)|GO:0005509(InterPro)|GO:0016020(InterPro)|GO:0046470(InterPro)
Hepe02g1477 755 Gene3D Endonuclease Chain A 442 647 - -
Hepe02g1477 755 PANTHER PHOSPHOLIPASE D 31 738 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1477 Hepe-Chr2:19180457 Hepe10g0254 Hepe-Chr10:2651338 9.05e-206 dispersed
Hepe02g1477 Hepe-Chr2:19180457 Hepe03g1618 Hepe-Chr3:73083410 1.52e-207 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g1477 K01115 - csv:101206396 1410.97