Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe02g1478 | ATGGATTCTTTGTGGATATTTGTGCAGCTCATCACAGTTGCAGCTTTCATAATCATGATCTTCAAAAGCAGCTTCAAGAAGGCCACACCATCTTCTAACTCCTTCATCTCCTCCAACCCTTCCCCCCTTCCTCCTTCCGGCTCCCTCGGCCTCCCGTTCGTCGGCGAAACCCTCCAGTTTGTTTCTTCCGCTTACTCTCACCGCCCCGAAAGCTTCATGGACAGCCGTCGCCGTCGGTATGGAAAGGTTTTCAAGTCCCATATATTTGGAAGTCCAACAATTGTTTCAACTGATGCTGAAGTGAATAGGTTTATTCTACAAAGTGATGCAAAGGCTTTTGTGACATCTTATCCAAAGTCTTTGACAGAGTTGATGGGGAAGTCTTCTATTTTGCTCATCAATGGCACTTTGCATAGAAAAATTCATGGCCTTATTGGAGCCTTCTTCAAGTCTTCTCATCTCAAAGCTCAATTAACTATTGACATGCAAAGCTATCTTCAAAAATCCATCTCTACTTGGAGTACTTGTCAACACAATCCTATCCACATTCAAGATGAAGCCAAAAATATTGCCTTTGAAGTACTAGTAAAGACACTGATTAGTTTGGAGCCTGGTGAAGAAATGGAATTTTTGAAGAAACAATTTCAAGAATTCATTGCTGGTCTTATGGCTTTCCCAATAAACATCCCAGGAAGCAGACTTTACAGATCATTACAGGCAAGAGCTAGAAGAAAGAAGATGAGTGAGATCAATTTGAATGATAATAAAGTCCCAAATGATGTTGTTGATGTTTTGTTGAATGATGGAAGCCAAGAAATTACAGATGAATTAATAGCAGATAATATGATTGATATGATGATTCCAGGCCAAGATTCAGTCCCAATCCTAATCGCTTTGGCCATAAAATACCTTTCTGATTGCCCATCTTCCCTTCAACAATTACTGGAAGAAAACATGGAGCTGAAAAGACTGAAAACTCAGCTTGGAGAGCCATTGATGTGGAGTGATTACTTGTCATTACCATTTACACAAAATGTCATAACGGAGACGCTAAGGATGGGAAACATTATAACAGGAGTGATGAGAAAGGCCATGAAAGACATTGAGATAAAAGGGTATTTAATACCTAAAGGATGGTGTGTCCTTGTATATTTTAGGTCAGTTCATGTTGATGAAAACCACTTTGAAAGCCCTTACAATTTCAATCCATGGAGATGGCAAGATAAAGACTCAAACAGCTCCAATTTCACTCCTTTTGGAGGGGGACTAAGATTGTGCCCTGGACTTGACTTAGCCAGACTAGAAGCTTCCATTTTCTTGCATCACTTTGTCACTGAATTCAGGTGGGTGGCTGAGGAAGACAATATTATCAGCTTCCCAACAGGATACGCTTCTTTAGCTGACGAGGCCGAGTCGACCTTGGAAAGGGGATCGACGCTTTCTTCCCTTCGGCCGACCCGACCGCACGAGGGGGGTCGACCTTTGCGGCTGGCTGAGACGAGCTCCTCGAGGAGCTTGGCTCCTTTGATGACGCTGAACCGACCTGGGTGGTCGGCTCCTCTAGAGCGTGACCGAACCGACCTATGTGGTCGACCTGACCTGTGTGGTCAGTTTCTCTGTGTCGACCCTTTGGGTTGA | 1638 | 43.53 | MDSLWIFVQLITVAAFIIMIFKSSFKKATPSSNSFISSNPSPLPPSGSLGLPFVGETLQFVSSAYSHRPESFMDSRRRRYGKVFKSHIFGSPTIVSTDAEVNRFILQSDAKAFVTSYPKSLTELMGKSSILLINGTLHRKIHGLIGAFFKSSHLKAQLTIDMQSYLQKSISTWSTCQHNPIHIQDEAKNIAFEVLVKTLISLEPGEEMEFLKKQFQEFIAGLMAFPINIPGSRLYRSLQARARRKKMSEINLNDNKVPNDVVDVLLNDGSQEITDELIADNMIDMMIPGQDSVPILIALAIKYLSDCPSSLQQLLEENMELKRLKTQLGEPLMWSDYLSLPFTQNVITETLRMGNIITGVMRKAMKDIEIKGYLIPKGWCVLVYFRSVHVDENHFESPYNFNPWRWQDKDSNSSNFTPFGGGLRLCPGLDLARLEASIFLHHFVTEFRWVAEEDNIISFPTGYASLADEAESTLERGSTLSSLRPTRPHEGGRPLRLAETSSSRSLAPLMTLNRPGWSAPLERDRTDLCGRPDLCGQFLCVDPLG | 545 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 19193017 | 19200819 | - | Hsped.02g14780.1 | Hepe02g1478 | 562979 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe02g1478 | 545 | PRINTS | E-class P450 group I signature | 344 | 362 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe02g1478 | 545 | PRINTS | E-class P450 group I signature | 426 | 449 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe02g1478 | 545 | PRINTS | E-class P450 group I signature | 384 | 408 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe02g1478 | 545 | PRINTS | E-class P450 group I signature | 416 | 426 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe02g1478 | 545 | PRINTS | E-class P450 group I signature | 77 | 96 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe02g1478 | 545 | PANTHER | CYTOCHROME P450 26 | 45 | 451 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)|GO:0016709(PANTHER) | |
| Hepe02g1478 | 545 | MobiDBLite | consensus disorder prediction | 477 | 500 | - | - | |
| Hepe02g1478 | 545 | FunFam | 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 | 37 | 465 | - | - | |
| Hepe02g1478 | 545 | SUPERFAMILY | Cytochrome P450 | 44 | 455 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe02g1478 | 545 | Gene3D | Cytochrome P450 | 35 | 464 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe02g1478 | 545 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 419 | 428 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Hepe02g1478 | 545 | Pfam | Cytochrome P450 | 45 | 455 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe02g1478 | 545 | CDD | CYP90-like | 76 | 461 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe01g0725 | Hepe-Chr1:70030965 | Hepe02g1478 | Hepe-Chr2:19193017 | 5.19e-115 | dispersed | |
| Hepe02g1478 | Hepe-Chr2:19193017 | Hepe04g1557 | Hepe-Chr4:71104230 | 3.87e-158 | dispersed | |
| Hepe03g1188 | Hepe-Chr3:65873608 | Hepe02g1478 | Hepe-Chr2:19193017 | 1.08e-72 | transposed | |
| Hepe02g3062 | Hepe-Chr2:79779298 | Hepe02g1478 | Hepe-Chr2:19193017 | 1.41e-62 | transposed | |
| Hepe02g1478 | Hepe-Chr2:19193017 | Hepe03g1471 | Hepe-Chr3:71482274 | 7.65e-229 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe02g1478 | K12638 | - | csv:101212581 | 731.865 |