Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g1503 | ATGATAAAAAGTTTGCTGTTTCAACAACAAGCTCAAGCTCAAGCTATGGAGGAAAATTTGTCGAATTTAACTTCAGCTTCCGGTGAAGCTAGTGCCTGCTCCGGCAACCATTCCGATCAGATTCCGGTCAACTATTCCGGCGGTGGCGGCCAGTATTTTTCTGCTCCACCACCACCAAAAAAGAAGAGAAACCTCCCCGGAAATCCAGACCCAGATGCGGAAGTGATAGCTTTATCGCCGAAGTCGCTTATGGCGACGAATCGATTCTTATGCGAGATCTGCAACAAGGGGTTTCAGAGAGATCAAAATCTTCAACTTCATAGAAGAGGGCACAATTTGCCATGGAAGTTGAAGCAAAGATCAAACAAAGATGTGATAAGGAAGAAAGTTTATGTGTGTCCAGAAACAAGCTGTGTTCACCATGATCCATCAAGGGCTCTTGGGGACTTGACAGGAATCAAGAAGCACTTTTGCAGAAAGCATGGTGAGAAGAAATGGAAATGTGATAAGTGCTCTAAGAGGTACGCAGTTCAATCAGATTGGAAAGCACATTCTAAGACTTGTGGCACTAGAGAGTACAGATGTGACTGTGGAACCCTTTTCTCGAGGAGGGATAGTTTCATCACCCATAGAGCTTTTTGTGATGCTTTGGCAGAGGAAAGTGCAAGATCAGCCATTACATCAAACCCAATACTAATTACCAATAATAATAATCAAAACCCTCCACTAATTTCCACTCCCATTTCTTCAACAATCTCCCATTTAAACTTTCAAACACAATCCCATTTCAATCCATTGGATATCAACTCATTCTCCCTCAAAAAAGAGCACCAAAATCATCACCAAATCAACTCACCCAATAATAATTTCATTCCCCCATGGCTGGCTGCTAATTATCCCTCAAGATCATCATTATTAGATCATAATCAAGACCTTAATCCAATCATAAACCCTAATAATAATCTTGGTCCTACTTCTCTTCATCTTCCAAGTGCTTCTTCCCCTTCTCCACACATGTCAGCCACAGCACTTCTCCAGAAAGCAGCTCAAATGGGAGCTACCATGAGCAGTAGTAATAATATTAATAATAATAATAATAATAATTCTGAGGATCATCACGTGCCTGTTTCTTCTGCCACCAATAATAACAACACTACAAGTTGTAATTTTGGCCTTAACTTGTCCTCCTCCTCACGTGACAATAATCCTCAGATTTTGATGATGGGCAATGAAGCTGCAGGGCTTTCTCATGCACTGCCACTCTACAGGAACAAATCCACTTCTAATTCTTCACTCCTTCAAAGCACTTTCATCAACACCACTTTCTCTCCCAGTGCTTTTGAAGGGACTTCTTTCGAATTAGATGCATTTGGAGGGGTTTTGAAGAAAGATCATGAGATTTTTAATGACCATGATCATAATGCAATCATAATGTCAAGATCAAGTGATCAAGAAGGGCTGAGTACAAGAGATTTCTTGGGGCTTAGAGCTATTTCTCACAGTGAGTTTTTGAGTAATATTGCAGCTGCTGGTTATGGTAATTGCATGAATAATGGTGCTGCTGGTCAAACTCCTCAAAGTCAAATTCAAAAGCAACCCACCTGGCAAGGTTAG | 1614 | 41.02 | MIKSLLFQQQAQAQAMEENLSNLTSASGEASACSGNHSDQIPVNYSGGGGQYFSAPPPPKKKRNLPGNPDPDAEVIALSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSNKDVIRKKVYVCPETSCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEESARSAITSNPILITNNNNQNPPLISTPISSTISHLNFQTQSHFNPLDINSFSLKKEHQNHHQINSPNNNFIPPWLAANYPSRSSLLDHNQDLNPIINPNNNLGPTSLHLPSASSPSPHMSATALLQKAAQMGATMSSSNNINNNNNNNSEDHHVPVSSATNNNNTTSCNFGLNLSSSSRDNNPQILMMGNEAAGLSHALPLYRNKSTSNSSLLQSTFINTTFSPSAFEGTSFELDAFGGVLKKDHEIFNDHDHNAIIMSRSSDQEGLSTRDFLGLRAISHSEFLSNIAAAGYGNCMNNGAAGQTPQSQIQKQPTWQG | 537 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 19588767 | 19591564 | - | Hsped.02g15030.1 | Hepe02g1503 | 563004 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g1503 | 537 | SMART | c2h2final6 | 89 | 111 | IPR013087 | - | |
Hepe02g1503 | 537 | SMART | c2h2final6 | 166 | 186 | IPR013087 | - | |
Hepe02g1503 | 537 | SMART | c2h2final6 | 131 | 161 | IPR013087 | - | |
Hepe02g1503 | 537 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 89 | 111 | IPR013087 | - | |
Hepe02g1503 | 537 | PANTHER | SERINE/THREONINE-PROTEIN KINASE RIO | 41 | 502 | IPR031140 | GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Hepe02g1503 | 537 | FunFam | protein indeterminate-domain 5, chloroplastic-like | 144 | 223 | - | - | |
Hepe02g1503 | 537 | FunFam | protein indeterminate-domain 12-like | 68 | 137 | - | - | |
Hepe02g1503 | 537 | Pfam | BIRD-IDD transcription factor, third C2HC zinc finger | 165 | 189 | - | - | |
Hepe02g1503 | 537 | Coils | Coil | 6 | 26 | - | - | |
Hepe02g1503 | 537 | Pfam | BIRD-IDD transcription factor, second C2H2 zinc finger | 127 | 161 | - | - | |
Hepe02g1503 | 537 | MobiDBLite | consensus disorder prediction | 356 | 382 | - | - | |
Hepe02g1503 | 537 | Gene3D | Classic Zinc Finger | 144 | 224 | - | - | |
Hepe02g1503 | 537 | Gene3D | Classic Zinc Finger | 70 | 140 | - | - | |
Hepe02g1503 | 537 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 91 | 111 | IPR013087 | - | |
Hepe02g1503 | 537 | MobiDBLite | consensus disorder prediction | 44 | 72 | - | - | |
Hepe02g1503 | 537 | SUPERFAMILY | beta-beta-alpha zinc fingers | 88 | 186 | IPR036236 | - | |
Hepe02g1503 | 537 | Pfam | BIRD-IDD transcription factor, fourth C2HC zinc finger | 192 | 227 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe01g0018 | Hepe-Chr1:2446251 | Hepe02g1503 | Hepe-Chr2:19588767 | 1.85e-97 | dispersed | |
Hepe01g1888 | Hepe-Chr1:83724621 | Hepe02g1503 | Hepe-Chr2:19588767 | 1.45e-105 | dispersed | |
Hepe02g1503 | Hepe-Chr2:19588767 | Hepe10g1107 | Hepe-Chr10:43772864 | 9.93e-108 | dispersed | |
Hepe02g1503 | Hepe-Chr2:19588767 | Hepe03g1458 | Hepe-Chr3:71360079 | 2.53e-127 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55042 | None | None | None | None | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g1503 | K25870 | - | csv:101204728 | 626.706 |