Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g1513 ATGATGGAAGAGATGTCTCCTGCTGTTTCTTTGACCCTTAGTTTGGGTAACCCGAAGTCTGATAGCTCAGGAAGTCCCGGCCATGTCGAGTTCACACGGCTAAAGCTGGTGACAGATACAGTAAATCTATTCTCTGCATCGACCCCTGACTCGGGTTCGATCGGTAGTGGTAGTTGCCATGATTTTAATGGTATAGTCGAGTGCGTAACTGTGTCGCAACCGAGTGATAGTGGTCTTAGAGACGGTTTTTGGGGGGGGTTGCCGAAGAATGGCACGAATTTGGCTGCAGATAAGGAGGATGCAACCTTATCTACTATGGATGACACTGATGAAATGATAGATGTTGGGTTGTTTTCCATTGATGGTGGTTCAAATATTAAAGTGCAAGAAGTTGTCCAAATTGGAGATGTTAGTAATGGTCATGTTGTTGCCAAGGCTATCATCTTGGTTGAATCCGGGAAGATTCCTACTAGTGAAGTTATTGTGGCGACGGTAAGCTCAAATCTAGAAGTATCTGCATCGTCGGAGCTAAACCCCCCTGCGGTAGTTTTCCAGTCGAAAGGCATTCGTAGTATCTTCGAACGGGAATGTATTCCCCTTTGGGGGTCCGTATCGATTTGTGGTAGAAGACCAGAAATGGAAGACGCAATTGCCGCAGTTCCTTGCTTTACAAAGATTCCTATCAAAATGCTTGTAGGGAATGTTTTGCTTAATGGAATGGGTCAAAGTTTAACACATCTCAACAGCCATTTTTTTGGTGTTTATGATGGACATGGGGGCCCTCAGGTTGCGGATTATTGTCGAGAGCGCATACACTTGGCATTAGCTGAAGAGATAAGAGGATTTAAACAAAATCTAAATAATGGAAGCAATGGAGAAAACTGGCAGCAGCATTGGGAGAGAACCTTTAACAATTGCTTTCTTAGGGTTGATGATGAAATAGAAGGAAAAGTTGGTAGAACAGTCAGTGAGAGCGATGGAGATGTTGCCGATACTAGCTTCGAGCCTGTTGCCCCGGAAACTGTTGGCTCTACCGCTGTTGTTGCCTTGGTCTGTTCATCACACATCATAGTTGCAAACTGTGGTGATTCAAGAGCAGTCCTATGTCGTGGTAAAGAACCCATGGCGTTATCAGTCGATCATAAACCAAATCGGGAAGATGAATACGCTAGGATCGAATCATCTGGGGGCAAGGTCATCCAGTGGAATGGACATCGTGTGTTTGGAGTTCTTGCGATGTCAAGATCCATCGGTGATAGATATTTGAAGCCATGGATTATTCCTGATCCGGAAGTCATGTTTGTTCCTCGTGCGAAAGAAGACGAATGTCTTATTTTAGCCAGTGATGGACTGTGGGATGTGATGACAAACGAGGAAGTCTGTGAAGTGGCTCGAAGGCGGATTCTGGTTTGGCACAAGAAACACGGGGCTTCATCTCTCGCCGAACGGGGCACGGGAGTTGACCCGGCTGCACAAGCTGCAGCAGATTACCTCTCAATGCTTGCTCTTCAAAAGGGAAGCAAAGACAACATCTCTGTGATTGTAGTGGACTTGAAATCTCAAAGGAAGTTCAAGACCAAATCGTAA 1587 45.43 MMEEMSPAVSLTLSLGNPKSDSSGSPGHVEFTRLKLVTDTVNLFSASTPDSGSIGSGSCHDFNGIVECVTVSQPSDSGLRDGFWGGLPKNGTNLAADKEDATLSTMDDTDEMIDVGLFSIDGGSNIKVQEVVQIGDVSNGHVVAKAIILVESGKIPTSEVIVATVSSNLEVSASSELNPPAVVFQSKGIRSIFERECIPLWGSVSICGRRPEMEDAIAAVPCFTKIPIKMLVGNVLLNGMGQSLTHLNSHFFGVYDGHGGPQVADYCRERIHLALAEEIRGFKQNLNNGSNGENWQQHWERTFNNCFLRVDDEIEGKVGRTVSESDGDVADTSFEPVAPETVGSTAVVALVCSSHIIVANCGDSRAVLCRGKEPMALSVDHKPNREDEYARIESSGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPDPEVMFVPRAKEDECLILASDGLWDVMTNEEVCEVARRRILVWHKKHGASSLAERGTGVDPAAQAAADYLSMLALQKGSKDNISVIVVDLKSQRKFKTKS 528
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 19765725 19769918 - Hsped.02g15130.1 Hepe02g1513 563014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g1513 528 SUPERFAMILY PP2C-like 193 520 IPR036457 -
Hepe02g1513 528 CDD PP2Cc 202 518 IPR001932 -
Hepe02g1513 528 ProSiteProfiles PPM-type phosphatase domain profile. 200 518 IPR001932 -
Hepe02g1513 528 MobiDBLite consensus disorder prediction 10 27 - -
Hepe02g1513 528 MobiDBLite consensus disorder prediction 1 27 - -
Hepe02g1513 528 Pfam Protein phosphatase 2C 221 511 IPR001932 -
Hepe02g1513 528 FunFam Protein phosphatase 2C 16 188 528 - -
Hepe02g1513 528 ProSitePatterns PPM-type phosphatase domain signature. 251 259 IPR000222 GO:0043169(InterPro)
Hepe02g1513 528 PANTHER PROTEIN PHOSPHATASE 168 517 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Hepe02g1513 528 Gene3D - 187 528 IPR036457 -
Hepe02g1513 528 SMART PP2C_4 190 516 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1513 Hepe-Chr2:19765725 Hepe09g0805 Hepe-Chr9:7890868 1.06e-82 dispersed
Hepe02g1513 Hepe-Chr2:19765725 Hepe08g1407 Hepe-Chr8:16615057 2.42e-182 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g1513 K14497 - csv:101203499 947.577